Aliases for LOC101593348 Gene

Subcategory (RNA class) for LOC101593348 Gene

lncRNA

Quality Score for this RNA gene is

12

Aliases for LOC101593348 Gene

  • Uncharacterized LOC101593348 3
  • NONHSAG012572 94

External Ids for LOC101593348 Gene

Previous GeneCards Identifiers for LOC101593348 Gene

  • GC12U901779

Summaries for LOC101593348 Gene

GeneCards Summary for LOC101593348 Gene

LOC101593348 (Uncharacterized LOC101593348) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC101593348 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101593348 Gene

Genomics for LOC101593348 Gene

GeneHancer (GH) Regulatory Elements for LOC101593348 Gene

Promoters and enhancers for LOC101593348 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J122222 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas 750.6 -0.6 -586 6.3 SP1 ZBTB40 ZBTB6 MLX SMARCE1 RBPJ POLR2A USF2 NR2F1 ATF1 DIABLO LOC101593348 lnc-DIABLO-1 ZCCHC8 RSRC2 SETD1B PSMD9 KNTC1 KDM2B ABCB9
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101593348 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101593348 Gene

Genomic Locations for LOC101593348 Gene
chr12:122,226,442-122,228,792
(GRCh38/hg38)
Size:
2,351 bases
Orientation:
Plus strand

Genomic View for LOC101593348 Gene

Genes around LOC101593348 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101593348 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101593348 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101593348 Gene

Proteins for LOC101593348 Gene

Post-translational modifications for LOC101593348 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101593348 Gene

Domains & Families for LOC101593348 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101593348 Gene

Function for LOC101593348 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101593348 Gene

Localization for LOC101593348 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101593348 Gene

Pathways & Interactions for LOC101593348 Gene

PathCards logo

SuperPathways for LOC101593348 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC101593348 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101593348 Gene

Drugs & Compounds for LOC101593348 Gene

No Compound Related Data Available

Transcripts for LOC101593348 Gene

mRNA/cDNA for LOC101593348 Gene

(1) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(1) RNACentral transcripts :
(1) NONCODE transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101593348 Gene

No ASD Table

Relevant External Links for LOC101593348 Gene

GeneLoc Exon Structure for
LOC101593348

Expression for LOC101593348 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101593348 Gene

Orthologs for LOC101593348 Gene

No data available for Orthologs and Evolution for LOC101593348 Gene

Paralogs for LOC101593348 Gene

No data available for Paralogs for LOC101593348 Gene

Variants for LOC101593348 Gene

Sequence variations from dbSNP and Humsavar for LOC101593348 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs202028496 likely-benign, not specified 122,226,007(+) G/C upstream_transcript_variant
rs574777883 likely-benign, not specified 122,224,520(+) T/C/G upstream_transcript_variant
rs372776075 uncertain-significance, not provided 122,225,960(+) G/A/C upstream_transcript_variant
rs139511903 uncertain-significance, not specified 122,225,996(+) A/T upstream_transcript_variant
rs199898020 uncertain-significance, not specified 122,224,516(+) G/A upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for LOC101593348 Gene

Variant ID Type Subtype PubMed ID
nsv475807 CNV novel sequence insertion 20440878

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for LOC101593348 Gene

Disorders for LOC101593348 Gene

No disorders were found for LOC101593348 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101593348 Gene

Publications for LOC101593348 Gene

No publications were found for LOC101593348 Gene.

No data available for External Links for LOC101593348 Gene

Products for LOC101593348 Gene

Sources for LOC101593348 Gene