Aliases for LOC101060179 Gene

Aliases for LOC101060179 Gene

  • Uncharacterized LOC101060179 3
  • Uncharacterized Protein LOC101060179 3

External Ids for LOC101060179 Gene

Previous GeneCards Identifiers for LOC101060179 Gene

  • GC11U901951

Summaries for LOC101060179 Gene

GeneCards Summary for LOC101060179 Gene

LOC101060179 (Uncharacterized LOC101060179) is a Protein Coding gene.

Additional gene information for LOC101060179 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101060179 Gene

Genomics for LOC101060179 Gene

GeneHancer (GH) Regulatory Elements for LOC101060179 Gene

Promoters and enhancers for LOC101060179 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J045207 Enhancer 0.8 ENCODE CraniofacialAtlas dbSUPER 0.6 -3.1 -3057 4.3 SP1 POLR2A RFX1 NR2F2 EBF1 RXRA PRDM10 SYT13 ENSG00000254664 ENSG00000254497 PRDM11 LOC101060179 lnc-SYT13-2 L13714-062
GH11J045202 Enhancer 0.2 dbSUPER 0.4 -10.4 -10374 1.3 SYT13 ENSG00000254664 ENSG00000254497 L13714-062 lnc-SYT13-2 LOC101060179 PRDM11
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101060179 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101060179 Gene

Genomic Locations for LOC101060179 Gene
chr11:45,213,066-45,214,744
(GRCh38/hg38)
Size:
1,679 bases
Orientation:
Plus strand

Genomic View for LOC101060179 Gene

Genes around LOC101060179 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101060179 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101060179 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101060179 Gene

Proteins for LOC101060179 Gene

Post-translational modifications for LOC101060179 Gene

No Post-translational modifications

Other Protein References for LOC101060179 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for LOC101060179 Gene

Domains & Families for LOC101060179 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101060179 Gene

Function for LOC101060179 Gene

Phenotypes From GWAS Catalog for LOC101060179 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101060179 Gene

Localization for LOC101060179 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101060179 Gene

Pathways & Interactions for LOC101060179 Gene

PathCards logo

SuperPathways for LOC101060179 Gene

No Data Available

Interacting Proteins for LOC101060179 Gene

Gene Ontology (GO) - Biological Process for LOC101060179 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101060179 Gene

Drugs & Compounds for LOC101060179 Gene

No Compound Related Data Available

Transcripts for LOC101060179 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101060179 Gene

No ASD Table

Relevant External Links for LOC101060179 Gene

GeneLoc Exon Structure for
LOC101060179

No data available for mRNA/cDNA for LOC101060179 Gene

Expression for LOC101060179 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101060179 Gene

Orthologs for LOC101060179 Gene

No data available for Orthologs and Evolution for LOC101060179 Gene

Paralogs for LOC101060179 Gene

No data available for Paralogs for LOC101060179 Gene

Variants for LOC101060179 Gene

Sequence variations from dbSNP and Humsavar for LOC101060179 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000395210 -- 45,214,771(+) G/C downstream_transcript_variant
rs1000499679 -- 45,210,546(+) G/A upstream_transcript_variant
rs1000615774 -- 45,210,853(+) C/T upstream_transcript_variant
rs1000849242 -- 45,214,959(+) C/A/T downstream_transcript_variant
rs1001455186 -- 45,213,691(+) G/A coding_sequence_variant, missense_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101060179 Gene

Disorders for LOC101060179 Gene

No disorders were found for LOC101060179 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101060179 Gene

Publications for LOC101060179 Gene

No publications were found for LOC101060179 Gene.

No data available for External Links for LOC101060179 Gene

Products for LOC101060179 Gene

Sources for LOC101060179 Gene