LOC101060089 Gene (Pseudogene)

Cleavage And Polyadenylation Specificity Factor Subunit 5-Like

GC11M117117
GIFtS:
2
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Aliases for LOC101060089 Gene

Aliases for LOC101060089 Gene

  • Cleavage And Polyadenylation Specificity Factor Subunit 5-Like 3

External Ids for LOC101060089 Gene

Previous GeneCards Identifiers for LOC101060089 Gene

  • GC11U901920

Summaries for LOC101060089 Gene

GeneCards Summary for LOC101060089 Gene

LOC101060089 (Cleavage And Polyadenylation Specificity Factor Subunit 5-Like) is a Pseudogene.

Additional gene information for LOC101060089 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101060089 Gene

Genomics for LOC101060089 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for LOC101060089 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH11J117117 Enhancer 0.3 Ensembl 0.4 +8.4 8383 1.2 HLF ENSG00000225236 lnc-SIK3-1 ENSG00000254851 APOA1 piR-30327-004 LOC101060089 SIK3 PAFAH1B2
GH11J117135 Enhancer 0.2 Ensembl 0.4 -9.1 -9117 0.2 ENSG00000254851 LOC653303 lnc-PAFAH1B2-4 LOC101060089 PAFAH1B2 SIK3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101060089 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC101060089 Gene

Genomic Locations for LOC101060089 Gene
chr11:117,117,731-117,126,384
(GRCh38/hg38)
Size:
8,654 bases
Orientation:
Minus strand

Genomic View for LOC101060089 Gene

Genes around LOC101060089 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101060089 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101060089 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LOC101060089 Gene

Proteins for LOC101060089 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for LOC101060089 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101060089 Gene

Domains & Families for LOC101060089 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101060089 Gene

Function for LOC101060089 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101060089 Gene

Localization for LOC101060089 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101060089 Gene

Pathways & Interactions for LOC101060089 Gene

PathCards logo

SuperPathways for LOC101060089 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC101060089 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC101060089 Gene

Drugs & Compounds for LOC101060089 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for LOC101060089 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101060089 Gene

No ASD Table

Relevant External Links for LOC101060089 Gene

GeneLoc Exon Structure for
LOC101060089

No data available for mRNA/cDNA for LOC101060089 Gene

Expression for LOC101060089 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC101060089 Gene

mRNA expression in normal human tissues for LOC101060089 Gene
mRNA expression by GTEx for LOC101060089 Gene
genes like me logo Genes that share expression patterns with LOC101060089: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101060089 Gene

Orthologs for LOC101060089 Gene

No data available for Orthologs and Evolution for LOC101060089 Gene

Paralogs for LOC101060089 Gene

No data available for Paralogs for LOC101060089 Gene

Variants for LOC101060089 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101060089 Gene

Disorders for LOC101060089 Gene

No disorders were found for LOC101060089 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101060089 Gene

Publications for LOC101060089 Gene

No publications were found for LOC101060089 Gene.

No data available for Mastermind for LOC101060089 Gene

Products for LOC101060089 Gene

Sources for LOC101060089 Gene