Aliases for LOC101059906 Gene

Aliases for LOC101059906 Gene

  • Collagen Alpha-2(IV) Chain-Like 3

External Ids for LOC101059906 Gene

Previous GeneCards Identifiers for LOC101059906 Gene

  • GC11U901934
  • GC11P000533
  • GC11P000534
  • GC11P000546

Summaries for LOC101059906 Gene

GeneCards Summary for LOC101059906 Gene

LOC101059906 (Collagen Alpha-2(IV) Chain-Like) is a Protein Coding gene.

Additional gene information for LOC101059906 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101059906 Gene

Genomics for LOC101059906 Gene

GeneHancer (GH) Regulatory Elements for LOC101059906 Gene

Promoters and enhancers for LOC101059906 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J000528 Enhancer 0.8 ENCODE dbSUPER 500.7 +0.5 472 1.6 CREB1 POLR2G REST ATF2 ZBTB33 AGO2 AGO1 RBM22 MAX RBM39 ENSG00000254739 LOC101059906 LRRC56 HRAS lnc-LMNTD2-4
GH11J000531 Enhancer 0.5 dbSUPER 0.7 +3.1 3052 0.5 ZNF341 POLR2A POLR2G GLIS1 AGO2 AGO1 RBFOX2 LRRC56 RNH1 TMEM80 ENSG00000254739 LOC101059906 lnc-LMNTD2-4
GH11J000532 Enhancer 0.4 dbSUPER 0.7 +4.2 4161 0.9 PRPF4 POLR2A POLR2G AGO1 RBFOX2 lnc-LMNTD2-4 RNH1 TMEM80 ENSG00000254739 HRAS LOC101059906 LRRC56
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101059906 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101059906 Gene

Genomic Locations for LOC101059906 Gene
chr11:528,484-532,263
(GRCh38/hg38)
Size:
3,780 bases
Orientation:
Plus strand

Genomic View for LOC101059906 Gene

Genes around LOC101059906 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101059906 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101059906 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101059906 Gene

Proteins for LOC101059906 Gene

Post-translational modifications for LOC101059906 Gene

No Post-translational modifications

Other Protein References for LOC101059906 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for LOC101059906 Gene

Domains & Families for LOC101059906 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101059906 Gene

Function for LOC101059906 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101059906 Gene

Localization for LOC101059906 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101059906 Gene

Pathways & Interactions for LOC101059906 Gene

PathCards logo

SuperPathways for LOC101059906 Gene

No Data Available

Interacting Proteins for LOC101059906 Gene

;

Gene Ontology (GO) - Biological Process for LOC101059906 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101059906 Gene

Drugs & Compounds for LOC101059906 Gene

No Compound Related Data Available

Transcripts for LOC101059906 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101059906 Gene

No ASD Table

Relevant External Links for LOC101059906 Gene

GeneLoc Exon Structure for
LOC101059906

No data available for mRNA/cDNA for LOC101059906 Gene

Expression for LOC101059906 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC101059906 Gene

genes like me logo Genes that share expression patterns with LOC101059906: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101059906 Gene

Orthologs for LOC101059906 Gene

No data available for Orthologs and Evolution for LOC101059906 Gene

Paralogs for LOC101059906 Gene

No data available for Paralogs for LOC101059906 Gene

Variants for LOC101059906 Gene

Additional dbSNP identifiers (rs#s) for LOC101059906 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101059906 Gene

Disorders for LOC101059906 Gene

No disorders were found for LOC101059906 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101059906 Gene

Publications for LOC101059906 Gene

No publications were found for LOC101059906 Gene.

No data available for Mastermind for LOC101059906 Gene

Products for LOC101059906 Gene

Sources for LOC101059906 Gene