Aliases for LOC100996671 Gene

Data sources for LOC100996671 Gene:

RNA type for LOC100996671 Gene


Aliases for LOC100996671 Gene

External Ids for LOC100996671 Gene

Previous GeneCards Identifiers for LOC100996671 Gene

  • GC12M127095
  • GC12M126610
  • GC12M126652

Summaries for LOC100996671 Gene

GeneCards Summary for LOC100996671 Gene

LOC100996671 (Uncharacterized LOC100996671) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC100996671 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100996671 Gene

Genomics for LOC100996671 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC100996671 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J126666 Enhancer 0.6 Ensembl ENCODE 14.9 +22.2 22213 3.4 CEBPB EP300 STAT3 JUND LOC100996671 ENSG00000278866 HSALNG0094960 ENSG00000255944 piR-55194-107 LOC107984449
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100996671 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC100996671 Gene

Latest Assembly
91,098 bases
Minus strand

Previous Assembly
(GRCh37/hg19 by Entrez Gene)
37,373 bases
Minus strand

(GRCh37/hg19 by Ensembl)
80,285 bases
Minus strand

Genomic View for LOC100996671 Gene

Genes around LOC100996671 on UCSC Golden Path with GeneCards custom track
LOC100996671 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC100996671 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100996671 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100996671 Gene

Proteins for LOC100996671 Gene

Post-translational modifications for LOC100996671 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100996671 Gene

Domains & Families for LOC100996671 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100996671 Gene

Function for LOC100996671 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100996671 Gene

Localization for LOC100996671 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100996671 Gene

Pathways & Interactions for LOC100996671 Gene

PathCards logo

SuperPathways for LOC100996671 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100996671 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100996671 Gene

Drugs & Compounds for LOC100996671 Gene

No Compound Related Data Available

Transcripts for LOC100996671 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC100996671 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS0000221613_9606 lncRNA 458 4

Ensembl: ENST00000545853 (view in UCSC) ,

LncBook: HSALNT0196883,

LNCipedia: lnc-DHX37-9:11,


URS00008C06DA_9606 lncRNA 706 3

RefSeq: NR_110036,

LncBook: HSALNT0196892,

LNCipedia: lnc-DHX37-9:13,

URS00004CDF42_9606 lncRNA 656 3

Ensembl: ENST00000537478 (view in UCSC) ,

LNCipedia: lnc-DHX37-9:10,


URS00008B4025_9606 lncRNA 549 3

RefSeq: NR_110034,

LncBook: HSALNT0196890,

LNCipedia: lnc-DHX37-9:15,

URS0000425C74_9606 lncRNA 526 3

Ensembl: ENST00000541065 (view in UCSC) ,

LNCipedia: lnc-DHX37-9:5,


LOC100996671 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LOC100996671 Gene

2 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100996671 Gene

No ASD Table

Relevant External Links for LOC100996671 Gene

GeneLoc Exon Structure for

Expression for LOC100996671 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC100996671 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC100996671

SOURCE GeneReport for Unigene cluster for LOC100996671 Gene:

genes like me logo Genes that share expression patterns with LOC100996671: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100996671 Gene

Orthologs for LOC100996671 Gene

Evolution for LOC100996671 Gene

Gene Tree for LOC100996671 (if available)
Gene Tree for LOC100996671 (if available)

No data available for Orthologs for LOC100996671 Gene

Paralogs for LOC100996671 Gene

No data available for Paralogs for LOC100996671 Gene

Variants for LOC100996671 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC100996671 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Structural Variations from Database of Genomic Variants (DGV) for LOC100996671 Gene

Variant ID Type Subtype PubMed ID
dgv1570n100 CNV gain 25217958
dgv1573n100 CNV gain 25217958
esv3581971 CNV gain 25503493
esv3631085 CNV loss 21293372
esv3631086 CNV loss 21293372
nsv1043188 CNV gain 25217958
nsv515762 CNV gain+loss 19592680

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Variation tolerance and Additional Variant Information for LOC100996671 Gene

Disorders for LOC100996671 Gene

Additional Disease Information for LOC100996671

Open Targets Platform
Open Targets Platform

No disorders were found for LOC100996671 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC100996671 Gene

Publications for LOC100996671 Gene

No publications were found for LOC100996671 Gene.

No data available for Mastermind for LOC100996671 Gene

Products for LOC100996671 Gene

Sources for LOC100996671 Gene