Aliases for LOC100996263 Gene

Data sources for LOC100996263 Gene:

Subcategory (RNA class) for LOC100996263 Gene

lncRNA

Aliases for LOC100996263 Gene

External Ids for LOC100996263 Gene

Previous GeneCards Identifiers for LOC100996263 Gene

  • GC01M118140

Summaries for LOC100996263 Gene

GeneCards Summary for LOC100996263 Gene

LOC100996263 (Uncharacterized LOC100996263) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC100996263 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100996263 Gene

Genomics for LOC100996263 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC100996263 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100996263 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC100996263 Gene

Latest Assembly
chr1:117,596,221-117,606,663
(GRCh38/hg38)
Size:
10,443 bases
Orientation:
Minus strand

Previous Assembly
chr1:118,139,454-118,148,392
(GRCh37/hg19 by Entrez Gene)
Size:
8,939 bases
Orientation:
Minus strand

chr1:118,139,454-118,148,392
(GRCh37/hg19 by Ensembl)
Size:
8,939 bases
Orientation:
Minus strand

Genomic View for LOC100996263 Gene

Genes around LOC100996263 on UCSC Golden Path with GeneCards custom track
LOC100996263 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC100996263 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100996263 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100996263 Gene

Proteins for LOC100996263 Gene

Post-translational modifications for LOC100996263 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100996263 Gene

Domains & Families for LOC100996263 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100996263 Gene

Function for LOC100996263 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100996263 Gene

Localization for LOC100996263 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100996263 Gene

Pathways & Interactions for LOC100996263 Gene

PathCards logo

SuperPathways for LOC100996263 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100996263 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100996263 Gene

Drugs & Compounds for LOC100996263 Gene

No Compound Related Data Available

Transcripts for LOC100996263 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC100996263 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00001F9555_9606 lncRNA 766 4

Ensembl: ENST00000425010 (view in UCSC) ,

LncBook: HSALNT0013390,

LNCipedia: lnc-GDAP2-1:17, lnc-GDAP2-1:4,

NONCODE: NONHSAT005490.2,

URS00000DDC19_9606 lncRNA 444 3

Ensembl: ENST00000456126 (view in UCSC) ,

LNCipedia: lnc-GDAP2-1:6,

NONCODE: NONHSAT005491.2,

URS000034D6C8_9606 lncRNA 380 3

Ensembl: ENST00000440801 (view in UCSC) ,

LNCipedia: lnc-GDAP2-1:5,

NONCODE: NONHSAT005483.2,

URS000075D717_9606 lncRNA 436 1

RefSeq: NR_121626,

URS00008B6424_9606 lncRNA 482 3

LncBook: HSALNT0013392,

LNCipedia: lnc-GDAP2-1:10,

NONCODE: NONHSAT005492.2,

LOC100996263 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LOC100996263 Gene

2 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100996263 Gene

No ASD Table

Relevant External Links for LOC100996263 Gene

GeneLoc Exon Structure for
LOC100996263

Expression for LOC100996263 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC100996263 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC100996263

SOURCE GeneReport for Unigene cluster for LOC100996263 Gene:

Hs.202533
genes like me logo Genes that share expression patterns with LOC100996263: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100996263 Gene

Orthologs for LOC100996263 Gene

Evolution for LOC100996263 Gene

ENSEMBL:
Gene Tree for LOC100996263 (if available)
TreeFam:
Gene Tree for LOC100996263 (if available)

No data available for Orthologs for LOC100996263 Gene

Paralogs for LOC100996263 Gene

No data available for Paralogs for LOC100996263 Gene

Variants for LOC100996263 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC100996263 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Structural Variations from Database of Genomic Variants (DGV) for LOC100996263 Gene

Variant ID Type Subtype PubMed ID
nsv831170 CNV gain 17160897

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Variation tolerance and Additional Variant Information for LOC100996263 Gene

Disorders for LOC100996263 Gene

No disorders were found for LOC100996263 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100996263 Gene

Publications for LOC100996263 Gene

No publications were found for LOC100996263 Gene.

No data available for Mastermind for LOC100996263 Gene

Products for LOC100996263 Gene

Sources for LOC100996263 Gene