Aliases for LOC100652777 Gene

Aliases for LOC100652777 Gene

  • Group 10 Secretory Phospholipase A2-Like 3

External Ids for LOC100652777 Gene

Previous GeneCards Identifiers for LOC100652777 Gene

  • GC16U901356
  • GC16M014827

Summaries for LOC100652777 Gene

GeneCards Summary for LOC100652777 Gene

LOC100652777 (Group 10 Secretory Phospholipase A2-Like) is a Protein Coding gene.

Additional gene information for LOC100652777 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100652777 Gene

Genomics for LOC100652777 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC100652777 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J014732 Promoter 0.7 Ensembl 600.7 +0.6 580 2 ZSCAN4 CTBP1 ZNF444 FOXA2 ZNF217 DPF2 FOXA1 ZNF579 NBN TRIM22 ENSG00000254609 LOC100652777 piR-37142-002 NPIPA3
GH16J014715 Enhancer 0.2 Ensembl 0.4 +16.7 16679 1.4 piR-43430-001 piR-51671-019 piR-53957-001 NPIPA3 LOC100652777
GH16J014709 Enhancer 0.2 Ensembl 0.4 +23.7 23679 1 NPIPA3 piR-39832-001 piR-51671-019 LOC100652777
GH16J014706 Enhancer 0.2 Ensembl 0.3 +26.0 26023 3.5 ENSG00000261523 NPIPA3 piR-35981-001 piR-39832-001 piR-58523-001 piR-59785-001 piR-54072-001 piR-54569-001 LOC100652777
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100652777 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC100652777 Gene

Genomic Locations for LOC100652777 Gene
chr16:14,709,055-14,733,780
(GRCh38/hg38)
Size:
24,726 bases
Orientation:
Minus strand
chr16:14,820,215-14,827,204
(GRCh37/hg19)
Size:
6,990 bases
Orientation:
Minus strand

Genomic View for LOC100652777 Gene

Genes around LOC100652777 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100652777 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100652777 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100652777 Gene

Proteins for LOC100652777 Gene

Post-translational modifications for LOC100652777 Gene

No Post-translational modifications

Other Protein References for LOC100652777 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for LOC100652777 Gene

Domains & Families for LOC100652777 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100652777 Gene

Function for LOC100652777 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100652777 Gene

Localization for LOC100652777 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100652777 Gene

Pathways & Interactions for LOC100652777 Gene

PathCards logo

SuperPathways for LOC100652777 Gene

No Data Available

Interacting Proteins for LOC100652777 Gene

Gene Ontology (GO) - Biological Process for LOC100652777 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100652777 Gene

Drugs & Compounds for LOC100652777 Gene

No Compound Related Data Available

Transcripts for LOC100652777 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100652777 Gene

No ASD Table

Relevant External Links for LOC100652777 Gene

GeneLoc Exon Structure for
LOC100652777

No data available for mRNA/cDNA for LOC100652777 Gene

Expression for LOC100652777 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC100652777 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100652777 Gene

This gene is overexpressed in Colon - Transverse (x24.7), Stomach (x8.4), Lung (x4.1), and Bladder (x4.0).
genes like me logo Genes that share expression patterns with LOC100652777: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100652777 Gene

Orthologs for LOC100652777 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for LOC100652777 Gene

Organism Taxonomy Gene Similarity Type Details
Chimpanzee
(Pan troglodytes)
Mammalia LOC739070 30
  • 95.47 (n)
Species where no ortholog for LOC100652777 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • Cow (Bos Taurus)
  • Dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Lizard (Anolis carolinensis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Mouse (Mus musculus)
  • Oppossum (Monodelphis domestica)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Platypus (Ornithorhynchus anatinus)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rat (Rattus norvegicus)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)
  • Zebrafish (Danio rerio)

No data available for Evolution for LOC100652777 Gene

Paralogs for LOC100652777 Gene

No data available for Paralogs for LOC100652777 Gene

Variants for LOC100652777 Gene

Additional dbSNP identifiers (rs#s) for LOC100652777 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100652777 Gene

Disorders for LOC100652777 Gene

No disorders were found for LOC100652777 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100652777 Gene

Publications for LOC100652777 Gene

No publications were found for LOC100652777 Gene.

No data available for Mastermind for LOC100652777 Gene

Products for LOC100652777 Gene

Sources for LOC100652777 Gene