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LOC100652768 (Uncharacterized LOC100652768) is an RNA Gene, and is affiliated with the lncRNA class.
GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
---|---|---|---|---|---|---|---|---|---|---|
GH11J117197 | Promoter/Enhancer | 1.9 | EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER | 600.7 | -0.7 | -661 | 10.9 | CTCF TEAD4 PRDM10 KDM1A FOXA1 ZIC2 POLR2A ZBTB20 EGR1 ZBTB40 | LOC100652768 TAGLN ENSG00000254851 PCSK7 APOA1 RNF214 BUD13 ENSG00000226645 SIDT2 ENSG00000280143 | |
GH11J117195 | Enhancer | 0.5 | Ensembl ENCODE dbSUPER | 0.4 | +6.5 | 6496 | 0.8 | ENSG00000254851 SIDT2 TAGLN piR-59581 LOC100652768 |
RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
---|---|---|---|---|
URS000075AE67_9606 | lncRNA | 1244 | 1 |
RefSeq: NR_045215, |
URS00008B8348_9606 | lncRNA | 3598 | 2 |
LNCipedia: lnc-PCSK7-1:4, NONCODE: NONHSAT024384.2, |
URS00008B996D_9606 | lncRNA | 2398 | 2 |
LNCipedia: lnc-PCSK7-1:1, NONCODE: NONHSAT024387.2, |
URS00008BB314_9606 | lncRNA | 1244 | 2 |
LNCipedia: lnc-PCSK7-1:3, NONCODE: NONHSAT024385.2, |
URS00008B40F9_9606 | lncRNA | 1242 | 2 |
LNCipedia: lnc-PCSK7-1:2, NONCODE: NONHSAT024386.2, |
Variant ID | Type | Subtype | PubMed ID |
---|---|---|---|
dgv2186n54 | CNV | loss | 21841781 |
dgv730n106 | OTHER | inversion | 24896259 |
nsv1078301 | OTHER | inversion | 25765185 |
nsv518908 | CNV | loss | 19592680 |
nsv524270 | CNV | loss | 19592680 |
nsv7223 | OTHER | inversion | 18451855 |
No disorders were found for LOC100652768 Gene.
No publications were found for LOC100652768 Gene.