Aliases for LOC100533846 Gene

Aliases for LOC100533846 Gene

  • Solute Carrier Family 30 Member 5 Pseudogene 3

External Ids for LOC100533846 Gene

Previous GeneCards Identifiers for LOC100533846 Gene

  • GC19U901494
  • GC19M046615

Summaries for LOC100533846 Gene

GeneCards Summary for LOC100533846 Gene

LOC100533846 (Solute Carrier Family 30 Member 5 Pseudogene) is a Pseudogene.

Additional gene information for LOC100533846 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100533846 Gene

Genomics for LOC100533846 Gene

GeneHancer (GH) Regulatory Elements for LOC100533846 Gene

Promoters and enhancers for LOC100533846 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J046114 Enhancer 1 Ensembl ENCODE dbSUPER 750.6 -1.7 -1705 2.2 SP1 PRDM1 IKZF1 BACH1 IKZF2 CBFB ZSCAN5C DPF2 BCL11A RUNX3 ENSG00000268053 LOC100533846 lnc-IGFL3-4 IGFL3 IGFL2 ENSG00000268460 ENSG00000267922
GH19J046117 Enhancer 0.5 Ensembl ENCODE dbSUPER 0.6 -4.4 -4441 2.1 IGFL3 IGFL2 ENSG00000268460 LOC100533846 ENSG00000267922
GH19J046110 Enhancer 0.3 dbSUPER 0.6 +2.4 2379 3.1 ZFHX2 ZNF664 IGFL3 IGFL2 ENSG00000268053 LOC100533846 lnc-IGFL3-4 ENSG00000267922
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100533846 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100533846 Gene

Genomic Locations for LOC100533846 Gene
chr19:46,111,077-46,113,996
(GRCh38/hg38)
Size:
2,920 bases
Orientation:
Minus strand
chr19:46,614,335-46,617,254
(GRCh37/hg19)
Size:
2,920 bases
Orientation:
Minus strand

Genomic View for LOC100533846 Gene

Genes around LOC100533846 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100533846 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100533846 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100533846 Gene

Proteins for LOC100533846 Gene

Post-translational modifications for LOC100533846 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100533846 Gene

Domains & Families for LOC100533846 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100533846 Gene

Function for LOC100533846 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100533846 Gene

Localization for LOC100533846 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100533846 Gene

Pathways & Interactions for LOC100533846 Gene

PathCards logo

SuperPathways for LOC100533846 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100533846 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100533846 Gene

Drugs & Compounds for LOC100533846 Gene

No Compound Related Data Available

Transcripts for LOC100533846 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100533846 Gene

No ASD Table

Relevant External Links for LOC100533846 Gene

GeneLoc Exon Structure for
LOC100533846

No data available for mRNA/cDNA for LOC100533846 Gene

Expression for LOC100533846 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100533846 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100533846 Gene

This gene is overexpressed in Testis (x13.1), Skin - Sun Exposed (Lower leg) (x9.1), Skin - Not Sun Exposed (Suprapubic) (x8.8), and Pituitary (x4.2).
genes like me logo Genes that share expression patterns with LOC100533846: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100533846 Gene

Orthologs for LOC100533846 Gene

No data available for Orthologs and Evolution for LOC100533846 Gene

Paralogs for LOC100533846 Gene

No data available for Paralogs for LOC100533846 Gene

Variants for LOC100533846 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100533846 Gene

Disorders for LOC100533846 Gene

No disorders were found for LOC100533846 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100533846 Gene

Publications for LOC100533846 Gene

No publications were found for LOC100533846 Gene.

No data available for External Links for LOC100533846 Gene

Products for LOC100533846 Gene

Sources for LOC100533846 Gene