Aliases for LOC100533663 Gene

Aliases for LOC100533663 Gene

  • Histidine Rich Glycoprotein Pseudogene 3
  • Histidine-Rich Glycoprotein (HRG) Pseudogene 5
  • AC109780.1 5

External Ids for LOC100533663 Gene

Previous GeneCards Identifiers for LOC100533663 Gene

  • GC03U901775
  • GC03P186406

Summaries for LOC100533663 Gene

GeneCards Summary for LOC100533663 Gene

LOC100533663 (Histidine Rich Glycoprotein Pseudogene) is a Pseudogene.

Additional gene information for LOC100533663 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100533663 Gene

Genomics for LOC100533663 Gene

GeneHancer (GH) Regulatory Elements for LOC100533663 Gene

Promoters and enhancers for LOC100533663 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J186682 Enhancer 0.8 Ensembl ENCODE 0.7 -4.3 -4283 1.3 HES1 MYC FOXA2 CREB3L1 SAP130 MAX NFE2 EHMT2 MNT NFATC3 KNG1 FETUB LOC100533663 lnc-HRG-2 piR-37567-129 LOC105374258 ENSG00000197099
GH03J186663 Promoter/Enhancer 1.2 EPDnew Ensembl ENCODE 0.4 -22.6 -22588 2.9 FOXK2 EP300 NCOR1 TEAD4 TEAD1 POLR2A FOXA2 NR2F2 ZBTB33 JUND HRG KNG1 FETUB AHSG piR-37567-129 LOC100533663 lnc-HRG-2 LOC105374258 ENSG00000197099
GH03J186669 Enhancer 0.8 Ensembl ENCODE 0.4 -17.5 -17462 1.4 EP300 CTBP1 ZNF316 TRIM24 CEBPG FOS CEBPB NFE2 JUND NFE2L1 FETUB KNG1 AHSG HRG piR-37567-129 LOC100533663 lnc-HRG-2 LOC105374258 ENSG00000197099
GH03J186694 Enhancer 0.3 Ensembl 0.4 +7.7 7672 0.4 FOS HRG FETUB AHSG ENSG00000226724 lnc-KNG1-1 LOC100533663 lnc-HRG-2 LOC105374258 ENSG00000197099
GH03J186683 Enhancer 0.2 Ensembl 0.7 -3.3 -3328 0.4 KNG1 FETUB LOC100533663 lnc-HRG-2 piR-37567-129 LOC105374258 ENSG00000197099
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100533663 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100533663 Gene

Genomic Locations for LOC100533663 Gene
chr3:186,687,329-186,692,506
(GRCh38/hg38)
Size:
5,178 bases
Orientation:
Plus strand
chr3:186,405,118-186,410,295
(GRCh37/hg19)
Size:
5,178 bases
Orientation:
Plus strand

Genomic View for LOC100533663 Gene

Genes around LOC100533663 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100533663 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100533663 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100533663 Gene

Proteins for LOC100533663 Gene

Post-translational modifications for LOC100533663 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100533663 Gene

Domains & Families for LOC100533663 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100533663 Gene

Function for LOC100533663 Gene

Phenotypes From GWAS Catalog for LOC100533663 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100533663 Gene

Localization for LOC100533663 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100533663 Gene

Pathways & Interactions for LOC100533663 Gene

PathCards logo

SuperPathways for LOC100533663 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC100533663 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100533663 Gene

Drugs & Compounds for LOC100533663 Gene

No Compound Related Data Available

Transcripts for LOC100533663 Gene

mRNA/cDNA for LOC100533663 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100533663 Gene

No ASD Table

Relevant External Links for LOC100533663 Gene

GeneLoc Exon Structure for
LOC100533663

Expression for LOC100533663 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC100533663 Gene

genes like me logo Genes that share expression patterns with LOC100533663: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100533663 Gene

Orthologs for LOC100533663 Gene

Evolution for LOC100533663 Gene

ENSEMBL:
Gene Tree for LOC100533663 (if available)
TreeFam:
Gene Tree for LOC100533663 (if available)

No data available for Orthologs for LOC100533663 Gene

Paralogs for LOC100533663 Gene

No data available for Paralogs for LOC100533663 Gene

Variants for LOC100533663 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100533663 Gene

Disorders for LOC100533663 Gene

No disorders were found for LOC100533663 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100533663 Gene

Publications for LOC100533663 Gene

No publications were found for LOC100533663 Gene.

No data available for Mastermind for LOC100533663 Gene

Products for LOC100533663 Gene

Sources for LOC100533663 Gene