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Aliases for LOC100533655 Gene
Summaries for LOC100533655 Gene
GeneCards Summary for LOC100533655 Gene
LOC100533655 (Aryl Hydrocarbon Receptor Pseudogene) is a Pseudogene.
Additional gene information for LOC100533655 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100533655 Gene
Genomics for LOC100533655 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for LOC100533655 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH06J025217 | Promoter/Enhancer | 1 | Ensembl CraniofacialAtlas | 600.7 | -0.8 | -814 | 1.4 | PRDM10 ZNF629 ZBTB17 ATF2 POLR2A ZNF366 SMARCA4 ZNF416 GFI1B | ENSG00000219681 LOC100533655 lnc-CARMIL1-4 RNY5P5 RF00019-090 CARMIL1 RIPOR2 CMAHP | |
| GH06J025223 | Enhancer | 0.7 | ENCODE | 0.7 | +4.9 | 4919 | 0.2 | CREB1 CTCF PRDM10 ZNF629 ZNF512 STAT3 PRDM1 ZNF143 REST RAD21 | RPL21P68 CARMIL1 LOC100533655 HSALNG0048667 RIPOR2 CMAHP | |
| GH06J025228 | Enhancer | 0.7 | Ensembl ENCODE | 0.4 | +11.5 | 11492 | 2.8 | JUND CEBPB JUN MAFF RCOR1 EP300 STAT3 MAFK POLR2A | CARMIL1 H3C4 HSALNG0048667 LOC100533655 RIPOR2 CMAHP | |
| GH06J025222 | Enhancer | 0.3 | Ensembl | 0.7 | +3.9 | 3892 | 0.4 | CEBPG ZNF664 | LOC100533655 HSALNG0048667 CARMIL1 RIPOR2 CMAHP |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around LOC100533655 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for LOC100533655 Gene
Genomic Locations for LOC100533655 Gene
- chr6:25,218,709-25,221,168
- (GRCh38/hg38)
- Size:
- 2,460 bases
- Orientation:
- Plus strand
- chr6:25,218,916-25,221,396
- (GRCh37/hg19)
- Size:
- 2,481 bases
- Orientation:
- Plus strand
Genomic View for LOC100533655 Gene
Genes around LOC100533655 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 6p22.2 by Entrez Gene
LOC100533655 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LOC100533655 Gene
Proteins for LOC100533655 Gene
Post-translational modifications for LOC100533655 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC100533655
- Origene Custom Protein Services for LOC100533655
No data available for DME Specific Peptides for LOC100533655 Gene
Domains & Families for LOC100533655 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100533655 Gene
Function for LOC100533655 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100533655 Gene
Localization for LOC100533655 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100533655 Gene
Transcripts for LOC100533655 Gene
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for LOC100533655 Gene
- GeneLoc Exon Structure for
- LOC100533655
No data available for mRNA/cDNA for LOC100533655 Gene
Expression for LOC100533655 Gene
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100533655 Gene
Orthologs for LOC100533655 Gene
No data available for Orthologs and Evolution for LOC100533655 Gene
Paralogs for LOC100533655 Gene
No data available for Paralogs for LOC100533655 Gene
Variants for LOC100533655 Gene
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100533655 Gene
Disorders for LOC100533655 Gene
No disorders were found for LOC100533655 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100533655 Gene
Publications for LOC100533655 Gene
No publications were found for LOC100533655 Gene.
No data available for Mastermind for LOC100533655 Gene
Products for LOC100533655 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC100533655
- Origene Custom Protein Services for LOC100533655
- Browse OriGene Inhibitory RNA Products For LOC100533655
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for LOC100533655
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For LOC100533655
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for LOC100533655
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for LOC100533655
- Search GeneCopoeia for miRNA 3'UTR Target clone products for LOC100533655
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for LOC100533655
Sources for LOC100533655 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB