Aliases for LOC100533655 Gene

Aliases for LOC100533655 Gene

  • Aryl Hydrocarbon Receptor Pseudogene 3

External Ids for LOC100533655 Gene

Previous GeneCards Identifiers for LOC100533655 Gene

  • GC06U902181

Summaries for LOC100533655 Gene

GeneCards Summary for LOC100533655 Gene

LOC100533655 (Aryl Hydrocarbon Receptor Pseudogene) is a Pseudogene.

Additional gene information for LOC100533655 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100533655 Gene

Genomics for LOC100533655 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC100533655 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J025217 Promoter/Enhancer 1 Ensembl CraniofacialAtlas 600.7 -0.8 -814 1.4 PRDM10 ZNF629 ZBTB17 ATF2 POLR2A ZNF366 SMARCA4 ZNF416 GFI1B ENSG00000219681 LOC100533655 lnc-CARMIL1-4 RNY5P5 RF00019-090 CARMIL1 RIPOR2 CMAHP
GH06J025223 Enhancer 0.7 ENCODE 0.7 +4.9 4919 0.2 CREB1 CTCF PRDM10 ZNF629 ZNF512 STAT3 PRDM1 ZNF143 REST RAD21 RPL21P68 CARMIL1 LOC100533655 HSALNG0048667 RIPOR2 CMAHP
GH06J025228 Enhancer 0.7 Ensembl ENCODE 0.4 +11.5 11492 2.8 JUND CEBPB JUN MAFF RCOR1 EP300 STAT3 MAFK POLR2A CARMIL1 H3C4 HSALNG0048667 LOC100533655 RIPOR2 CMAHP
GH06J025222 Enhancer 0.3 Ensembl 0.7 +3.9 3892 0.4 CEBPG ZNF664 LOC100533655 HSALNG0048667 CARMIL1 RIPOR2 CMAHP
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100533655 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC100533655 Gene

Genomic Locations for LOC100533655 Gene
chr6:25,218,709-25,221,168
(GRCh38/hg38)
Size:
2,460 bases
Orientation:
Plus strand
chr6:25,218,916-25,221,396
(GRCh37/hg19)
Size:
2,481 bases
Orientation:
Plus strand

Genomic View for LOC100533655 Gene

Genes around LOC100533655 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100533655 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100533655 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100533655 Gene

Proteins for LOC100533655 Gene

Post-translational modifications for LOC100533655 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100533655 Gene

Domains & Families for LOC100533655 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100533655 Gene

Function for LOC100533655 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100533655 Gene

Localization for LOC100533655 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100533655 Gene

Pathways & Interactions for LOC100533655 Gene

PathCards logo

SuperPathways for LOC100533655 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100533655 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100533655 Gene

Drugs & Compounds for LOC100533655 Gene

No Compound Related Data Available

Transcripts for LOC100533655 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100533655 Gene

No ASD Table

Relevant External Links for LOC100533655 Gene

GeneLoc Exon Structure for
LOC100533655

No data available for mRNA/cDNA for LOC100533655 Gene

Expression for LOC100533655 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC100533655 Gene

genes like me logo Genes that share expression patterns with LOC100533655: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100533655 Gene

Orthologs for LOC100533655 Gene

No data available for Orthologs and Evolution for LOC100533655 Gene

Paralogs for LOC100533655 Gene

No data available for Paralogs for LOC100533655 Gene

Variants for LOC100533655 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100533655 Gene

Disorders for LOC100533655 Gene

No disorders were found for LOC100533655 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100533655 Gene

Publications for LOC100533655 Gene

No publications were found for LOC100533655 Gene.

No data available for Mastermind for LOC100533655 Gene

Products for LOC100533655 Gene

Sources for LOC100533655 Gene