Aliases for LOC100507373 Gene

Subcategory (RNA class) for LOC100507373 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LOC100507373 Gene

  • Uncharacterized LOC100507373 3
  • Novel Transcript, Antisense To LPHN1 5
  • NONHSAG024944 92
  • HSALNG0124284 167
  • CTB-55O6.12 3
  • Lnc-MISP3-1 168
  • AC022098.1 5

External Ids for LOC100507373 Gene

Additional External Ids for LOC100507373 Gene

Previous GeneCards Identifiers for LOC100507373 Gene

  • GC19P014248

Summaries for LOC100507373 Gene

GeneCards Summary for LOC100507373 Gene

LOC100507373 (Uncharacterized LOC100507373) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC100507373 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100507373 Gene

Genomics for LOC100507373 Gene

GeneHancer (GH) Regulatory Elements for LOC100507373 Gene

Promoters and enhancers for LOC100507373 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100507373 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100507373 Gene

Genomic Locations for LOC100507373 Gene
chr19:14,137,146-14,171,267
(GRCh38/hg38)
Size:
34,122 bases
Orientation:
Plus strand
chr19:14,247,980-14,282,079
(GRCh37/hg19)
Size:
34,100 bases
Orientation:
Plus strand

Genomic View for LOC100507373 Gene

Genes around LOC100507373 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100507373 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100507373 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100507373 Gene

Proteins for LOC100507373 Gene

Post-translational modifications for LOC100507373 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100507373 Gene

Domains & Families for LOC100507373 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100507373 Gene

Function for LOC100507373 Gene

Phenotypes From GWAS Catalog for LOC100507373 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100507373 Gene

Localization for LOC100507373 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100507373 Gene

Pathways & Interactions for LOC100507373 Gene

PathCards logo

SuperPathways for LOC100507373 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC100507373 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100507373 Gene

Drugs & Compounds for LOC100507373 Gene

No Compound Related Data Available

Transcripts for LOC100507373 Gene

mRNA/cDNA for LOC100507373 Gene

6 RNACentral transcripts :
1 REFSEQ mRNAs :
1 NCBI additional mRNA sequence :
6 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
3 NONCODE transcripts :
1 LncBook transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100507373 Gene

No ASD Table

Relevant External Links for LOC100507373 Gene

GeneLoc Exon Structure for
LOC100507373

Expression for LOC100507373 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC100507373 Gene

SOURCE GeneReport for Unigene cluster for LOC100507373 Gene:

Hs.720437
genes like me logo Genes that share expression patterns with LOC100507373: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100507373 Gene

Orthologs for LOC100507373 Gene

Evolution for LOC100507373 Gene

ENSEMBL:
Gene Tree for LOC100507373 (if available)
TreeFam:
Gene Tree for LOC100507373 (if available)

No data available for Orthologs for LOC100507373 Gene

Paralogs for LOC100507373 Gene

No data available for Paralogs for LOC100507373 Gene

Variants for LOC100507373 Gene

Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for LOC100507373 Gene

SNP ID Clinical significance and condition Chr 19 pos Variation AA Info Type
747994 Likely Benign: not provided 14,155,350(+) C/T NON_CODING_TRANSCRIPT_VARIANT,INTRON_VARIANT
755784 Likely Benign: not provided 14,155,410(+) G/A NON_CODING_TRANSCRIPT_VARIANT,SYNONYMOUS_VARIANT
773899 Benign: not provided 14,161,564(+) T/A MISSENSE_VARIANT
rs1202804312 Uncertain Significance: Inborn genetic diseases 14,160,140(+) C/T MISSENSE_VARIANT

Additional dbSNP identifiers (rs#s) for LOC100507373 Gene

Structural Variations from Database of Genomic Variants (DGV) for LOC100507373 Gene

Variant ID Type Subtype PubMed ID
dgv49n68 CNV loss 17160897
nsv1072864 CNV deletion 25765185
nsv2423 CNV insertion 18451855
nsv517436 CNV loss 19592680
nsv578642 CNV gain 21841781
nsv578663 CNV loss 21841781
nsv828452 CNV loss 20364138
nsv953980 CNV deletion 24416366

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for LOC100507373 Gene

Disorders for LOC100507373 Gene

No disorders were found for LOC100507373 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100507373 Gene

Publications for LOC100507373 Gene

No publications were found for LOC100507373 Gene.

No data available for Mastermind for LOC100507373 Gene

Products for LOC100507373 Gene

Sources for LOC100507373 Gene