Aliases for LOC100507156 Gene

Subcategory (RNA class) for LOC100507156 Gene

lncRNA

Number of RNA Genes sources:

2 / 17

Aliases for LOC100507156 Gene

  • Uncharacterized LOC100507156 3
  • NONHSAG049763.2 91
  • HSALNG0063981 164

External Ids for LOC100507156 Gene

Previous GeneCards Identifiers for LOC100507156 Gene

  • GC08P023193

Summaries for LOC100507156 Gene

GeneCards Summary for LOC100507156 Gene

LOC100507156 (Uncharacterized LOC100507156) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC100507156 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100507156 Gene

Genomics for LOC100507156 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC100507156 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100507156 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC100507156 Gene

Genomic Locations for LOC100507156 Gene
chr8:23,336,171-23,366,126
(GRCh38/hg38)
Size:
29,956 bases
Orientation:
Plus strand
chr8:23,193,684-23,223,638
(GRCh37/hg19)
Size:
29,955 bases
Orientation:
Plus strand

Genomic View for LOC100507156 Gene

Genes around LOC100507156 on UCSC Golden Path with GeneCards custom track
LOC100507156 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC100507156 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100507156 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100507156 Gene

Proteins for LOC100507156 Gene

Post-translational modifications for LOC100507156 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100507156 Gene

Domains & Families for LOC100507156 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100507156 Gene

Function for LOC100507156 Gene

Phenotypes From GWAS Catalog for LOC100507156 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100507156 Gene

Localization for LOC100507156 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100507156 Gene

Pathways & Interactions for LOC100507156 Gene

PathCards logo

SuperPathways for LOC100507156 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100507156 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100507156 Gene

Drugs & Compounds for LOC100507156 Gene

No Compound Related Data Available

Transcripts for LOC100507156 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC100507156 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000075CE0C_9606 lncRNA 4374 3

RefSeq: NR_038323,

Ensembl: ENST00000519692 (view in UCSC) ,

NONCODE: NONHSAT125560.2,

URS00008C36DC_9606 lncRNA 1798 2

LncBook: HSALNT0134175,

NONCODE: NONHSAT125559.2,

URS00009B9BA1_9606 lncRNA 4798 1

NONCODE: NONHSAT215551.1,

LOC100507156 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LOC100507156 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100507156 Gene

No ASD Table

Relevant External Links for LOC100507156 Gene

GeneLoc Exon Structure for
LOC100507156

Expression for LOC100507156 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC100507156 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC100507156

SOURCE GeneReport for Unigene cluster for LOC100507156 Gene:

Hs.661130
genes like me logo Genes that share expression patterns with LOC100507156: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100507156 Gene

Orthologs for LOC100507156 Gene

No data available for Orthologs and Evolution for LOC100507156 Gene

Paralogs for LOC100507156 Gene

No data available for Paralogs for LOC100507156 Gene

Variants for LOC100507156 Gene

Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for LOC100507156 Gene

SNP ID Clinical significance and condition Chr 08 pos Variation AA Info Type
716530 Benign: not provided 23,360,210(+) T/G SYNONYMOUS_VARIANT
792103 Benign: not provided 23,360,240(+) G/A SYNONYMOUS_VARIANT

Additional dbSNP identifiers (rs#s) for LOC100507156 Gene

Structural Variations from Database of Genomic Variants (DGV) for LOC100507156 Gene

Variant ID Type Subtype PubMed ID
dgv7139n100 CNV loss 25217958
esv25599 CNV loss 19812545
nsv1017570 CNV gain 25217958
nsv1026345 CNV gain 25217958
nsv1134912 CNV tandem duplication 24896259
nsv610778 CNV loss 21841781
nsv6118 CNV insertion 18451855
nsv831268 CNV gain 17160897

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for LOC100507156 Gene

Disorders for LOC100507156 Gene

No disorders were found for LOC100507156 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100507156 Gene

Publications for LOC100507156 Gene

No publications were found for LOC100507156 Gene.

No data available for Mastermind for LOC100507156 Gene

Products for LOC100507156 Gene

Sources for LOC100507156 Gene