Aliases for LOC100506747 Gene

Aliases for LOC100506747 Gene

  • Alpha-1,3-Mannosyl-Glycoprotein 4-Beta-N-Acetylglucosaminyltransferase-Like Protein LOC641515 Homolog 3
  • 4933406M09Rik Pseudogene 3

External Ids for LOC100506747 Gene

Previous GeneCards Identifiers for LOC100506747 Gene

  • GC01M202957
  • GC01M202958
  • GC01M202961

Summaries for LOC100506747 Gene

GeneCards Summary for LOC100506747 Gene

LOC100506747 (Alpha-1,3-Mannosyl-Glycoprotein 4-Beta-N-Acetylglucosaminyltransferase-Like Protein LOC641515 Homolog) is a Pseudogene.

Additional gene information for LOC100506747 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100506747 Gene

Genomics for LOC100506747 Gene

GeneHancer (GH) Regulatory Elements for LOC100506747 Gene

Promoters and enhancers for LOC100506747 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100506747 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100506747 Gene

Genomic Locations for LOC100506747 Gene
chr1:202,986,452-203,007,265
(GRCh38/hg38)
Size:
20,814 bases
Orientation:
Minus strand
chr1:202,955,685-202,957,710
(GRCh37/hg19)
Size:
2,026 bases
Orientation:
Minus strand

Genomic View for LOC100506747 Gene

Genes around LOC100506747 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100506747 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100506747 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100506747 Gene

Proteins for LOC100506747 Gene

Post-translational modifications for LOC100506747 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100506747 Gene

Domains & Families for LOC100506747 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100506747 Gene

Function for LOC100506747 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100506747 Gene

Localization for LOC100506747 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100506747 Gene

Pathways & Interactions for LOC100506747 Gene

PathCards logo

SuperPathways for LOC100506747 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100506747 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100506747 Gene

Drugs & Compounds for LOC100506747 Gene

No Compound Related Data Available

Transcripts for LOC100506747 Gene

mRNA/cDNA for LOC100506747 Gene

(3) Additional mRNA sequences :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100506747 Gene

No ASD Table

Relevant External Links for LOC100506747 Gene

GeneLoc Exon Structure for
LOC100506747

Expression for LOC100506747 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100506747 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100506747 Gene

This gene is overexpressed in Testis (x45.6) and Pituitary (x7.3).
genes like me logo Genes that share expression patterns with LOC100506747: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100506747 Gene

Orthologs for LOC100506747 Gene

No data available for Orthologs and Evolution for LOC100506747 Gene

Paralogs for LOC100506747 Gene

No data available for Paralogs for LOC100506747 Gene

Variants for LOC100506747 Gene

Sequence variations from dbSNP and Humsavar for LOC100506747 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000891513 -- 203,000,021(-) C/G intron_variant
rs1000904156 -- 202,993,164(-) A/C intron_variant
rs1001033586 -- 202,986,872(-) G/A non_coding_transcript_variant
rs1001178218 -- 202,999,785(-) G/A/C intron_variant
rs1001257614 -- 203,004,102(-) G/T intron_variant

Structural Variations from Database of Genomic Variants (DGV) for LOC100506747 Gene

Variant ID Type Subtype PubMed ID
nsv4121 CNV deletion 18451855
nsv832370 CNV loss 17160897

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for LOC100506747 Gene

Disorders for LOC100506747 Gene

No disorders were found for LOC100506747 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100506747 Gene

Publications for LOC100506747 Gene

  1. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose JE … Uhl GR (Molecular medicine (Cambridge, Mass.) 2010) 3 56
  2. The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3 56

No data available for External Links for LOC100506747 Gene

Products for LOC100506747 Gene

Sources for LOC100506747 Gene