LOC100506691 Gene (RNA Gene)

Uncharacterized LOC100506691

GC12P122063
GIFtS:
10
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Aliases for LOC100506691 Gene

Subcategory (RNA class) for LOC100506691 Gene

lncRNA

Number of RNA Genes sources:

4 / 17

Aliases for LOC100506691 Gene

  • Uncharacterized LOC100506691 3
  • NONHSAG012565.2 91
  • NONHSAG012566.2 91
  • HSALNG0094625 164
  • HSALNG0094626 164
  • Lnc-MLXIP-12 165
  • Lnc-MLXIP-1 165

External Ids for LOC100506691 Gene

Previous GeneCards Identifiers for LOC100506691 Gene

  • GC12P122505
  • GC12P122503

Summaries for LOC100506691 Gene

GeneCards Summary for LOC100506691 Gene

LOC100506691 (Uncharacterized LOC100506691) is an RNA Gene, and is affiliated with the lncRNA class.

Rfam classification for LOC100506691 Gene

  • Metazoan signal recognition particle RNA

Additional gene information for LOC100506691 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for LOC100506691 Gene

Genomics for LOC100506691 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data

GeneHancers around LOC100506691 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC100506691 Gene

Genomic Locations for LOC100506691 Gene
chr12:122,063,290-122,078,514
(GRCh38/hg38)
Size:
15,225 bases
Orientation:
Plus strand
chr12:122,501,212-122,506,670
(GRCh37/hg19)
Size:
5,459 bases
Orientation:
Plus strand

Genomic View for LOC100506691 Gene

Genes around LOC100506691 on UCSC Golden Path with GeneCards custom track
LOC100506691 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC100506691 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100506691 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LOC100506691 Gene

Proteins for LOC100506691 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for LOC100506691 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100506691 Gene

Domains & Families for LOC100506691 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100506691 Gene

Function for LOC100506691 Gene

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  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for LOC100506691 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100506691 Gene

Localization for LOC100506691 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100506691 Gene

Pathways & Interactions for LOC100506691 Gene

PathCards logo

SuperPathways for LOC100506691 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100506691 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100506691 Gene

Drugs & Compounds for LOC100506691 Gene

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  1. Drug
No Compound Related Data Available

Transcripts for LOC100506691 Gene

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  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC100506691 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000A77235_9606 lncRNA 811 2

RefSeq: NR_135044,

LNCipedia: lnc-MLXIP-12:1,

URS00008B7687_9606 lncRNA 2869 3

LncBook: HSALNT0196187,

LNCipedia: lnc-MLXIP-1:1,

NONCODE: NONHSAT031489.2,

URS00008BD115_9606 lncRNA 632 3

LncBook: HSALNT0196185,

LNCipedia: lnc-MLXIP-12:14,

NONCODE: NONHSAT031487.2,

URS00008BD9DA_9606 lncRNA 436 3

LncBook: HSALNT0196186,

LNCipedia: lnc-MLXIP-12:15,

NONCODE: NONHSAT031488.2,

URS00008B7C0B_9606 lncRNA 2494 2

LNCipedia: lnc-MLXIP-1:2,

NONCODE: NONHSAT031490.2,

LOC100506691 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LOC100506691 Gene

6 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100506691 Gene

No ASD Table

Relevant External Links for LOC100506691 Gene

GeneLoc Exon Structure for
LOC100506691

Expression for LOC100506691 Gene

Products:

  1. Primer
  2. Gene Expression Assay

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC100506691 Gene

mRNA expression in normal human tissues for LOC100506691 Gene
mRNA expression by GTEx for LOC100506691 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100506691 Gene

This gene is overexpressed in Pancreas (x9.3), Uterus (x5.1), Colon - Sigmoid (x4.5), and Ovary (x4.0).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC100506691

SOURCE GeneReport for Unigene cluster for LOC100506691 Gene:

Hs.536336
genes like me logo Genes that share expression patterns with LOC100506691: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100506691 Gene

Orthologs for LOC100506691 Gene

No data available for Orthologs and Evolution for LOC100506691 Gene

Paralogs for LOC100506691 Gene

No data available for Paralogs for LOC100506691 Gene

Variants for LOC100506691 Gene

Products:

  1. SNP Genotyping and Copy Number Assay

Additional dbSNP identifiers (rs#s) for LOC100506691 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100506691 Gene

Disorders for LOC100506691 Gene

No disorders were found for LOC100506691 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100506691 Gene

Publications for LOC100506691 Gene

No publications were found for LOC100506691 Gene.

No data available for Mastermind for LOC100506691 Gene

Products for LOC100506691 Gene

Sources for LOC100506691 Gene