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Aliases for LOC100506691 Gene
Subcategory (RNA class) for LOC100506691 Gene
ncRNA
Aliases for LOC100506691 Gene
External Ids for LOC100506691 Gene
- NCBI Entrez Gene: 100506691
- Ensembl: ENSG00000256546
Previous GeneCards Identifiers for LOC100506691 Gene
- GC12P122505
- GC12P122503
Summaries for LOC100506691 Gene
GeneCards Summary for LOC100506691 Gene
LOC100506691 (Uncharacterized LOC100506691) is an RNA Gene, and is affiliated with the ncRNA class. Diseases associated with LOC100506691 include Childhood Acute Lymphocytic Leukemia.
Rfam classification for LOC100506691 Gene
-
Metazoan signal recognition particle RNA
Additional gene information for LOC100506691 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for LOC100506691 Gene
Genomics for LOC100506691 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for LOC100506691 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around LOC100506691 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for LOC100506691 Gene
Latest Assembly
- chr12:122,063,289-122,078,514
- (GRCh38/hg38)
- Size:
- 15,226 bases
- Orientation:
- Plus strand
Previous Assembly
- chr12:122,501,196-122,506,466
- (GRCh37/hg19 by Entrez Gene)
- Size:
- 5,271 bases
- Orientation:
- Plus strand
- chr12:122,501,212-122,506,522
- (GRCh37/hg19 by Ensembl)
- Size:
- 5,311 bases
- Orientation:
- Plus strand
Genomic View for LOC100506691 Gene
Genes around LOC100506691 on UCSC Golden Path with GeneCards custom track
LOC100506691 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path
- Cytogenetic band:
-
- 12q24.31 by Entrez Gene
- 12q24.31 by Ensembl
LOC100506691 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LOC100506691 Gene
Proteins for LOC100506691 Gene
Post-translational modifications for LOC100506691 Gene
No Post-translational modifications
No data available for DME Specific Peptides for LOC100506691 Gene
Domains & Families for LOC100506691 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100506691 Gene
Function for LOC100506691 Gene
Phenotypes From GWAS Catalog for LOC100506691 Gene
CRISPR products for research
Inhibitory RNAs for research
Clone products for research
Cell Lines for research
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100506691 Gene
Localization for LOC100506691 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100506691 Gene
Transcripts for LOC100506691 Gene
Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC100506691 Gene
| RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
|---|---|---|---|---|
| URS00008BC968_9606 | lncRNA | 855 | 4 |
Ensembl: ENST00000538790 (view in UCSC) , LncBook: HSALNT0196180, LNCipedia: lnc-MLXIP-12:2, NONCODE: NONHSAT031484.2, |
| URS00008B5CF2_9606 | lncRNA | 590 | 4 |
Ensembl: ENST00000540968 (view in UCSC) , LncBook: HSALNT0196182, LNCipedia: lnc-MLXIP-12:3, NONCODE: NONHSAT031485.2, |
| URS00008C00A8_9606 | lncRNA | 895 | 3 |
Ensembl: ENST00000423999 (view in UCSC) , LNCipedia: lnc-MLXIP-12:13, NONCODE: NONHSAT031486.2, |
| URS0000A77235_9606 | lncRNA | 815 | 2 |
RefSeq: NR_135044, LNCipedia: lnc-MLXIP-12:1, |
| URS0000EF35E3_9606 | lncRNA | 850 | 1 |
Ensembl: ENST00000653475 (view in UCSC) , |
LOC100506691 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path
Additional transcripts not in RNAcentral for LOC100506691 Gene
- 6 NCBI additional mRNA sequence :
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000535337 436 nts (view in UCSC)
CRISPR products for research
Inhibitory RNAs for research
Clone products for research
Relevant External Links for LOC100506691 Gene
- GeneLoc Exon Structure for
- LOC100506691
Expression for LOC100506691 Gene
mRNA differential expression in normal tissues according to GTEx for LOC100506691 Gene
This gene is overexpressed in Pancreas (x9.3), Uterus (x5.1), Colon - Sigmoid (x4.5), and Ovary (x4.0).
Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC100506691
SOURCE GeneReport for Unigene cluster for LOC100506691 Gene:
Hs.536336
Gene Expression Assays for research
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100506691 Gene
Orthologs for LOC100506691 Gene
No data available for Orthologs for LOC100506691 Gene
Paralogs for LOC100506691 Gene
No data available for Paralogs for LOC100506691 Gene
Variants for LOC100506691 Gene
All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).
SNP Genotyping and Copy Number Assays for research
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100506691 Gene
Disorders for LOC100506691 Gene
| Disorder | Aliases | PubMed IDs |
|---|---|---|
| childhood acute lymphocytic leukemia |
|
Search LOC100506691 in MalaCards
View complete list of genes associated with diseases
Additional Disease Information for LOC100506691
- Open Targets Platform
- Open Targets Platform
No data available for UniProtKB/Swiss-Prot and Genatlas for LOC100506691 Gene
Publications for LOC100506691 Gene
- A childhood acute lymphoblastic leukemia-specific lncRNA implicated in prednisolone resistance, cell proliferation, and migration. (PMID: 27980230) Ouimet M … Sinnett D (Oncotarget 2017) 74
No data available for Mastermind for LOC100506691 Gene
Products for LOC100506691 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC100506691
- Origene Custom Protein Services for LOC100506691
- Browse OriGene Inhibitory RNA Products For LOC100506691
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for LOC100506691
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For LOC100506691
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for LOC100506691
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for LOC100506691
- Search GeneCopoeia for miRNA 3'UTR Target clone products for LOC100506691
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for LOC100506691
Sources for LOC100506691 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM® (Updated: 05-Mar-2021)
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) MedlinePlus Genetics
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNAcentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Open Targets Platform
- (175) 5SRRNADB
- (176) snoDB
- (177) MirGeneDB