Aliases for LOC100506672 Gene

Aliases for LOC100506672 Gene

  • Cytochrome C Oxidase Subunit 7C Pseudogene 3

External Ids for LOC100506672 Gene

Previous GeneCards Identifiers for LOC100506672 Gene

  • GC01M202737

Summaries for LOC100506672 Gene

GeneCards Summary for LOC100506672 Gene

LOC100506672 (Cytochrome C Oxidase Subunit 7C Pseudogene) is a Pseudogene.

Additional gene information for LOC100506672 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100506672 Gene

Genomics for LOC100506672 Gene

GeneHancer (GH) Regulatory Elements for LOC100506672 Gene

Promoters and enhancers for LOC100506672 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J202765 Enhancer 0.2 Ensembl 750.6 +1.1 1107 1.2 ENSG00000235449 LOC100506672 PCAT6 KDM5B lnc-SYT2-2
GH01J202770 Enhancer 0.4 Ensembl 0.6 -2.9 -2893 0.4 SCRT2 CEBPB CEBPG KDM5B PCAT6 MGAT4EP RABIF LOC100506672 SLC25A39P1
GH01J202781 Enhancer 0.5 Ensembl 0.4 -14.0 -13993 1 ZNF362 ARNT OSR2 ZNF335 PRDM6 SLC25A39P1 LOC100506672 KDM5B lnc-SYT2-3
GH01J202782 Enhancer 0.5 Ensembl 0.4 -15.6 -15592 1.8 SREBF1 ZNF362 ZNF18 CEBPB ZNF335 ZNF664 ZBTB33 KDM5B PCAT6 MGAT4EP SLC25A39P1 LOC100506672 lnc-SYT2-3
GH01J202774 Enhancer 0.3 Ensembl 0.4 -7.5 -7493 0.4 ZNF316 EMSY KDM5B TMEM183A PCAT6 LOC100506672 SLC25A39P1 lnc-SYT2-3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100506672 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100506672 Gene

Genomic Locations for LOC100506672 Gene
chr1:202,767,095-202,767,508
(GRCh38/hg38)
Size:
414 bases
Orientation:
Minus strand
chr1:202,736,357-202,736,548
(GRCh37/hg19)
Size:
192 bases
Orientation:
Minus strand

Genomic View for LOC100506672 Gene

Genes around LOC100506672 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100506672 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100506672 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100506672 Gene

Proteins for LOC100506672 Gene

Post-translational modifications for LOC100506672 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100506672 Gene

Domains & Families for LOC100506672 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100506672 Gene

Function for LOC100506672 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100506672 Gene

Localization for LOC100506672 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100506672 Gene

Pathways & Interactions for LOC100506672 Gene

PathCards logo

SuperPathways for LOC100506672 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100506672 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100506672 Gene

Drugs & Compounds for LOC100506672 Gene

No Compound Related Data Available

Transcripts for LOC100506672 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100506672 Gene

No ASD Table

Relevant External Links for LOC100506672 Gene

GeneLoc Exon Structure for
LOC100506672

No data available for mRNA/cDNA for LOC100506672 Gene

Expression for LOC100506672 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100506672 Gene

genes like me logo Genes that share expression patterns with LOC100506672: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100506672 Gene

Orthologs for LOC100506672 Gene

No data available for Orthologs and Evolution for LOC100506672 Gene

Paralogs for LOC100506672 Gene

No data available for Paralogs for LOC100506672 Gene

Variants for LOC100506672 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100506672 Gene

Disorders for LOC100506672 Gene

No disorders were found for LOC100506672 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100506672 Gene

Publications for LOC100506672 Gene

No publications were found for LOC100506672 Gene.

No data available for External Links for LOC100506672 Gene

Products for LOC100506672 Gene

Sources for LOC100506672 Gene