Aliases for LOC100506076 Gene

Subcategory (RNA class) for LOC100506076 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for LOC100506076 Gene

  • Uncharacterized LOC100506076 3
  • NONHSAG028643.2 91
  • NONHSAG028653.2 91
  • Lnc-ANKRD36B-3 165
  • HSALNG0017125 164
  • Lnc-ANKRD36-1 165
  • HSALNG0017139 164

External Ids for LOC100506076 Gene

Previous GeneCards Identifiers for LOC100506076 Gene

  • GC02P097944

Summaries for LOC100506076 Gene

GeneCards Summary for LOC100506076 Gene

LOC100506076 (Uncharacterized LOC100506076) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC100506076 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100506076 Gene

Genomics for LOC100506076 Gene

Genomic Locations for LOC100506076 Gene

Genomic Locations for LOC100506076 Gene
chr2:97,278,717-97,291,878
(GRCh38/hg38)
Size:
13,162 bases
Orientation:
Plus strand

Genomic View for LOC100506076 Gene

Genes around LOC100506076 on UCSC Golden Path with GeneCards custom track
LOC100506076 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC100506076 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100506076 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100506076 Gene

No data available for GeneHancer (GH) Regulatory Elements for LOC100506076 Gene

Proteins for LOC100506076 Gene

Post-translational modifications for LOC100506076 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100506076 Gene

Domains & Families for LOC100506076 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100506076 Gene

Function for LOC100506076 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100506076 Gene

Localization for LOC100506076 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100506076 Gene

Pathways & Interactions for LOC100506076 Gene

PathCards logo

SuperPathways for LOC100506076 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100506076 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100506076 Gene

Drugs & Compounds for LOC100506076 Gene

No Compound Related Data Available

Transcripts for LOC100506076 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC100506076 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000779C05_9606 lncRNA 2830 4

Ensembl: ENST00000610408 (view in UCSC) ,

LncBook: HSALNT0036075,

LNCipedia: lnc-ANKRD36-1:8, lnc-ANKRD36B-3:17,

NONCODE: NONHSAT185149.1,

URS000075C032_9606 lncRNA 804 4

RefSeq: NR_103733,

LncBook: HSALNT0036078, HSALNT0036096,

LNCipedia: lnc-ANKRD36-1:5, lnc-ANKRD36B-3:21,

NONCODE: NONHSAT072620.2, NONHSAT072632.2,

URS000075C2E6_9606 lncRNA 593 4

RefSeq: NR_103732,

LncBook: HSALNT0036071, HSALNT0036095,

LNCipedia: lnc-ANKRD36-1:2, lnc-ANKRD36B-3:8,

NONCODE: NONHSAT072616.2, NONHSAT072631.2,

URS000077B7FC_9606 lncRNA 724 3

Ensembl: ENST00000621982 (view in UCSC) ,

LNCipedia: lnc-ANKRD36-1:11, lnc-ANKRD36B-3:28,

NONCODE: NONHSAT185145.1,

URS00007E40C8_9606 lncRNA 704 1

RefSeq: NR_130704,

LOC100506076 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LOC100506076 Gene

2 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100506076 Gene

No ASD Table

Relevant External Links for LOC100506076 Gene

GeneLoc Exon Structure for
LOC100506076

Expression for LOC100506076 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100506076 Gene

Orthologs for LOC100506076 Gene

No data available for Orthologs and Evolution for LOC100506076 Gene

Paralogs for LOC100506076 Gene

No data available for Paralogs for LOC100506076 Gene

Variants for LOC100506076 Gene

Additional dbSNP identifiers (rs#s) for LOC100506076 Gene

Structural Variations from Database of Genomic Variants (DGV) for LOC100506076 Gene

Variant ID Type Subtype PubMed ID
dgv1142e212 CNV loss 25503493
dgv1145e212 CNV gain 25503493
dgv1147e212 CNV loss 25503493
dgv1148e212 CNV loss 25503493
dgv1149e212 CNV gain 25503493
dgv4010n100 CNV gain 25217958
dgv4011n100 CNV loss 25217958
dgv4015n100 CNV gain+loss 25217958
dgv4016n100 CNV loss 25217958
dgv4024n100 CNV gain 25217958
dgv4025n100 CNV gain 25217958
dgv4026n100 CNV gain 25217958
dgv607e201 CNV deletion 23290073
esv2759077 CNV gain+loss 17122850
esv2760609 CNV gain+loss 21179565
esv2763630 CNV gain+loss 21179565
esv3425717 CNV duplication 20981092
esv3575270 CNV gain 25503493
esv3575281 CNV gain 25503493
esv3591699 CNV loss 21293372
esv3892959 CNV loss 25118596
nsv1000203 CNV gain+loss 25217958
nsv1008339 CNV gain+loss 25217958
nsv1010807 CNV gain 25217958
nsv1125311 OTHER inversion 24896259
nsv1135873 CNV deletion 24896259
nsv1141356 CNV duplication 24896259
nsv1145714 CNV duplication 26484159
nsv1148786 OTHER inversion 26484159
nsv1151122 CNV duplication 26484159
nsv1152885 CNV duplication 26484159
nsv470477 CNV loss 18288195
nsv517613 CNV gain+loss 19592680
nsv522486 CNV gain 19592680
nsv7323 OTHER inversion 18451855
nsv818074 CNV loss 17921354
nsv953486 CNV deletion 24416366
nsv953487 CNV duplication 24416366
nsv961457 CNV duplication 23825009
nsv961839 CNV duplication 23825009
nsv997395 CNV loss 25217958
nsv999561 CNV loss 25217958

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Variation tolerance and Additional Variant Information for LOC100506076 Gene

Disorders for LOC100506076 Gene

No disorders were found for LOC100506076 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100506076 Gene

Publications for LOC100506076 Gene

  1. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo MF … Soares MB (Genome research 1996) 3

No data available for Mastermind for LOC100506076 Gene

Products for LOC100506076 Gene

Sources for LOC100506076 Gene