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Aliases for LOC100505788 Gene
Aliases for LOC100505788 Gene
External Ids for LOC100505788 Gene
- NCBI Entrez Gene: 100505788
Previous GeneCards Identifiers for LOC100505788 Gene
- GC01M090128
Summaries for LOC100505788 Gene
GeneCards Summary for LOC100505788 Gene
LOC100505788 (NDUFA4 Mitochondrial Complex Associated Pseudogene) is a Pseudogene.
Additional gene information for LOC100505788 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100505788 Gene
Genomics for LOC100505788 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for LOC100505788 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH01J089669 | Enhancer | 1.2 | FANTOM5 ENCODE dbSUPER | 0.4 | -8.8 | -8842 | 2.1 | SP1 BCL11A SIN3A TRIM22 IRF4 EBF1 JUND NFE2 BATF ZNF24 | LRRC8C ENSG00000231613 LRRC8C-DT GBP4 GBP5 LRRC8D ZNF326 LRRC8B HSALNG0005081 LOC100505788 | |
| GH01J089648 | Enhancer | 1.1 | Ensembl ENCODE dbSUPER | 0.4 | +6.2 | 6232 | 14.6 | BCL11A FEZF1 MNT IRF4 EBF1 CBFB BATF ZNF24 ELF1 ZNF384 | LRRC8C LRRC8C-DT ENSG00000231613 RN7SKP272 GEMIN8P4 ZNF326 ENSG00000226394 LOC100505788 lnc-LRRC8B-4 ENSG00000271949 | |
| GH01J089672 | Enhancer | 1.1 | FANTOM5 ENCODE dbSUPER | 0.4 | -10.8 | -10816 | 0.3 | ZNF639 ZNF843 FOSL1 NFE2 JUND ZNF133 MEIS2 CUX1 ATF1 ZNF629 | LRRC8C LRRC8C-DT GBP4 GBP5 ZNF326 LRRC8B LRRC8D HSALNG0005081 LOC100505788 ENSG00000271949 | |
| GH01J089666 | Enhancer | 0.3 | dbSUPER | 0.4 | -6.2 | -6186 | 2.2 | IKZF1 | LRRC8C LRRC8C-DT LOC100505788 HSALNG0005081 ENSG00000271949 ENSG00000230735 LRRC8D |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around LOC100505788 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for LOC100505788 Gene
Latest Assembly
- chr1:89,661,053-89,661,533
- (GRCh38/hg38)
- Size:
- 481 bases
- Orientation:
- Minus strand
Previous Assembly
- chr1:90,126,612-90,127,092
- (GRCh37/hg19 by Entrez Gene)
- Size:
- 481 bases
- Orientation:
- Minus strand
Genomic View for LOC100505788 Gene
Genes around LOC100505788 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 1p22.2 by Entrez Gene
LOC100505788 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LOC100505788 Gene
Proteins for LOC100505788 Gene
Post-translational modifications for LOC100505788 Gene
No Post-translational modifications
Antibodies for research
Protein products for research
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC100505788
- Origene Custom Protein Services for LOC100505788
Assay products for research
No data available for DME Specific Peptides for LOC100505788 Gene
Domains & Families for LOC100505788 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100505788 Gene
Function for LOC100505788 Gene
Animal Models for research
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
miRNA products for research
Inhibitory RNAs for research
Clone products for research
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100505788 Gene
Localization for LOC100505788 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100505788 Gene
Transcripts for LOC100505788 Gene
miRNA products for research
Inhibitory RNAs for research
Clone products for research
Relevant External Links for LOC100505788 Gene
- GeneLoc Exon Structure for
- LOC100505788
No data available for mRNA/cDNA for LOC100505788 Gene
Expression for LOC100505788 Gene
Primer products for research
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100505788 Gene
Orthologs for LOC100505788 Gene
No data available for Orthologs and Evolution for LOC100505788 Gene
Paralogs for LOC100505788 Gene
No data available for Paralogs for LOC100505788 Gene
Variants for LOC100505788 Gene
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100505788 Gene
Disorders for LOC100505788 Gene
No disorders were found for LOC100505788 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100505788 Gene
Publications for LOC100505788 Gene
No publications were found for LOC100505788 Gene.
No data available for Mastermind for LOC100505788 Gene
Products for LOC100505788 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC100505788
- Origene Custom Protein Services for LOC100505788
- Browse OriGene Inhibitory RNA Products For LOC100505788
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for LOC100505788
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For LOC100505788
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for LOC100505788
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for LOC100505788
- Search GeneCopoeia for miRNA 3'UTR Target clone products for LOC100505788
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for LOC100505788
Sources for LOC100505788 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM® (Updated: 05-Mar-2021)
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) MedlinePlus Genetics
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNAcentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Open Targets Platform
- (175) 5SRRNADB
- (176) snoDB
- (177) MirGeneDB