Aliases for LOC100505502 Gene

Aliases for LOC100505502 Gene

  • Putative UPF0607 Protein FLJ37424 3
  • Putative UPF0607 Protein FLJ37424-Like 3

External Ids for LOC100505502 Gene

Previous GeneCards Identifiers for LOC100505502 Gene

  • GC10M031651

Summaries for LOC100505502 Gene

GeneCards Summary for LOC100505502 Gene

LOC100505502 (Putative UPF0607 Protein FLJ37424) is a Protein Coding gene.

Additional gene information for LOC100505502 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100505502 Gene

Genomics for LOC100505502 Gene

GeneHancer (GH) Regulatory Elements for LOC100505502 Gene

Promoters and enhancers for LOC100505502 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J031384 Enhancer 1 Ensembl ENCODE 0.4 -20.2 -20224 2.2 SP1 EP300 RELA MEF2C BCL11A TCF12 CBFB POLR2A SRF ZNF207 lnc-ZNF438-4 LOC100505502 ZEB1 lnc-MAP3K8-25
GH10J031395 Enhancer 0.8 Ensembl ENCODE 0.3 -34.7 -34724 10.4 KLF4 KLF7 OSR2 KLF9 MEF2B KLF8 FOXA1 STAT1 PRDM6 FEZF1 lnc-ZNF438-4 ZEB1-AS1 LOC100505502 ZEB1
GH10J031371 Enhancer 0.5 Ensembl 0.4 -8.5 -8524 3.2 BCL6 PRDM6 ZNF18 ZNF664 ZSCAN21 ZNF692 FOXA3 LOC100505502 lnc-ZNF438-4 lnc-MAP3K8-25 ZEB1
GH10J031390 Enhancer 0.3 Ensembl 0.3 -27.4 -27424 1 FOS NANOG ZEB1-AS1 lnc-ZNF438-4 LOC100505502 ZEB1
GH10J031380 Enhancer 0.3 Ensembl 0.4 -16.2 -16224 0.6 HNRNPK LOC100505502 lnc-ZNF438-4 ZEB1 lnc-MAP3K8-25
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100505502 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100505502 Gene

Genomic Locations for LOC100505502 Gene
chr10:31,362,778-31,364,077
(GRCh38/hg38)
Size:
1,300 bases
Orientation:
Minus strand
chr10:31,650,356-31,688,682
(GRCh37/hg19)
Size:
38,327 bases
Orientation:
Minus strand

Genomic View for LOC100505502 Gene

Genes around LOC100505502 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100505502 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100505502 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100505502 Gene

Proteins for LOC100505502 Gene

Post-translational modifications for LOC100505502 Gene

No Post-translational modifications

Other Protein References for LOC100505502 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for LOC100505502 Gene

Domains & Families for LOC100505502 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100505502 Gene

Function for LOC100505502 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100505502 Gene

Localization for LOC100505502 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100505502 Gene

Pathways & Interactions for LOC100505502 Gene

PathCards logo

SuperPathways for LOC100505502 Gene

No Data Available

Interacting Proteins for LOC100505502 Gene

;

Gene Ontology (GO) - Biological Process for LOC100505502 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100505502 Gene

Drugs & Compounds for LOC100505502 Gene

No Compound Related Data Available

Transcripts for LOC100505502 Gene

mRNA/cDNA for LOC100505502 Gene

1 REFSEQ mRNAs :
1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100505502 Gene

No ASD Table

Relevant External Links for LOC100505502 Gene

GeneLoc Exon Structure for
LOC100505502

Expression for LOC100505502 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC100505502 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100505502 Gene

This gene is overexpressed in Testis (x26.4) and Muscle - Skeletal (x4.5).

Integrated Proteomics: protein expression in normal tissues and cell lines from MOPED for LOC100505502 Gene



Protein tissue co-expression partners for LOC100505502 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC100505502

SOURCE GeneReport for Unigene cluster for LOC100505502 Gene:

Hs.730227
genes like me logo Genes that share expression patterns with LOC100505502: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100505502 Gene

Orthologs for LOC100505502 Gene

No data available for Orthologs and Evolution for LOC100505502 Gene

Paralogs for LOC100505502 Gene

No data available for Paralogs for LOC100505502 Gene

Variants for LOC100505502 Gene

Additional dbSNP identifiers (rs#s) for LOC100505502 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100505502 Gene

Disorders for LOC100505502 Gene

No disorders were found for LOC100505502 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100505502 Gene

Publications for LOC100505502 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 54

No data available for Mastermind for LOC100505502 Gene

Products for LOC100505502 Gene

Sources for LOC100505502 Gene