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LOC100422628 Gene(Pseudogene)

Glutamic-Oxaloacetic Transaminase 2, Mitochondrial (Aspartate Aminotransferase 2) Pseudogene

GCID:
GC0XM011353
GIFtS:
7

Aliases for LOC100422628 Gene

Aliases for LOC100422628 Gene

  • Glutamic-Oxaloacetic Transaminase 2, Mitochondrial (Aspartate Aminotransferase 2) Pseudogene 3
  • AC002366.1 5

External Ids for LOC100422628 Gene

Previous GeneCards Identifiers for LOC100422628 Gene

  • GC0XU901541

Summaries for LOC100422628 Gene

GeneCards Summary for LOC100422628 Gene

LOC100422628 (Glutamic-Oxaloacetic Transaminase 2, Mitochondrial (Aspartate Aminotransferase 2) Pseudogene) is a Pseudogene.

Additional gene information for LOC100422628 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100422628 Gene

Genomics for LOC100422628 Gene

GeneHancer (GH) Regulatory Elements for LOC100422628 Gene

Promoters and enhancers for LOC100422628 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XI011334 Enhancer 0.5 dbSUPER 550.8 +1.6 1615 0.5 L3MBTL2 HMBOX1 ZBTB33 MGA ZNF395 ZNF592 LOC100422628 MIR548AX ARHGAP6
GH0XI011336 Enhancer 0.4 ENCODE 550.8 -1.6 -1626 1.5 HNF4A YY1 LOC100422628 GC0XM011637 ARHGAP6
GH0XI011340 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -6.1 -6085 2.4 FOXA2 SMAD1 ATF1 ARNT YY1 NCOA2 TCF12 ATF7 RUNX3 RXRA HCCS MSL3 LOC100422628 GC0XM011637 ARHGAP6
GH0XI011350 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 -15.6 -15624 2.2 PKNOX1 ATF1 IRF4 ZNF766 ATF7 RUNX3 CAVIN1 ZNF592 MEF2D GMEB1 LOC100422628 GC0XM011637 ARHGAP6
GH0XI011426 Promoter/Enhancer 2 EPDnew Ensembl ENCODE dbSUPER 0.2 -91.8 -91754 1.8 HDAC1 ATF1 TAF9B RB1 NFRKB NFXL1 EGR1 ARID2 ATF7 CREM ARHGAP6 LOC100422628 GC0XM011637
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100422628 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100422628 Gene

Genomic Locations for LOC100422628 Gene
chrX:11,334,233-11,335,901
(GRCh38/hg38)
Size:
1,669 bases
Orientation:
Minus strand
chrX:11,352,353-11,354,021
(GRCh37/hg19)

Genomic View for LOC100422628 Gene

Genes around LOC100422628 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100422628 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100422628 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100422628 Gene

Proteins for LOC100422628 Gene

Post-translational modifications for LOC100422628 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100422628 Gene

Domains & Families for LOC100422628 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100422628 Gene

Function for LOC100422628 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100422628 Gene

Localization for LOC100422628 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100422628 Gene

Pathways & Interactions for LOC100422628 Gene

SuperPathways for LOC100422628 Gene

No Data Available

Interacting Proteins for LOC100422628 Gene

Gene Ontology (GO) - Biological Process for LOC100422628 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100422628 Gene

Drugs & Compounds for LOC100422628 Gene

No Compound Related Data Available

Transcripts for LOC100422628 Gene

mRNA/cDNA for LOC100422628 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100422628 Gene

No ASD Table

Relevant External Links for LOC100422628 Gene

GeneLoc Exon Structure for
LOC100422628

Expression for LOC100422628 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100422628 Gene

genes like me logo Genes that share expression patterns with LOC100422628: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100422628 Gene

Orthologs for LOC100422628 Gene

Evolution for LOC100422628 Gene

ENSEMBL:
Gene Tree for LOC100422628 (if available)
TreeFam:
Gene Tree for LOC100422628 (if available)

No data available for Orthologs for LOC100422628 Gene

Paralogs for LOC100422628 Gene

No data available for Paralogs for LOC100422628 Gene

Variants for LOC100422628 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100422628 Gene

Disorders for LOC100422628 Gene

No disorders were found for LOC100422628 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100422628 Gene

Publications for LOC100422628 Gene

No publications were found for LOC100422628 Gene.

Products for LOC100422628 Gene

Sources for LOC100422628 Gene

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