Aliases for LOC100422623 Gene

Aliases for LOC100422623 Gene

  • CEA Cell Adhesion Molecule 1 Pseudogene 3
  • Carcinoembryonic Antigen-Related Cell Adhesion Molecule 1 (Biliary Glycoprotein) Pseudogene 3
  • Carcinoembryonic Antigen Related Cell Adhesion Molecule 1 Pseudogene 3

External Ids for LOC100422623 Gene

Previous GeneCards Identifiers for LOC100422623 Gene

  • GC19U901425
  • GC19P042308

Summaries for LOC100422623 Gene

GeneCards Summary for LOC100422623 Gene

LOC100422623 (CEA Cell Adhesion Molecule 1 Pseudogene) is a Pseudogene.

Additional gene information for LOC100422623 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100422623 Gene

Genomics for LOC100422623 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC100422623 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J041808 Promoter 0.3 Ensembl 600.7 +1.6 1590 0.2 LOC100422623 piR-33279-001 LYPD4 DMRTC2 CEACAM3 HNRNPA1P52
GH19J041802 Enhancer 1 FANTOM5 ENCODE dbSUPER 0.7 -4.8 -4848 1.7 HDAC1 YY1 SOX6 WT1 ZFHX2 CTCF SPI1 EBF1 KLF17 YY2 HSALNG0126230 CEACAM3 CEACAM4 DMRTC2 DEDD2 LYPD4 CEACAM6 CEACAM21 TMEM91 B9D2
GH19J041800 Enhancer 0.6 FANTOM5 dbSUPER 0.4 -6.0 -5958 0.3 ZIC2 ZFHX2 HSALNG0126230 CEACAM4 CEACAM3 DEDD2 LYPD4 DMRTC2 CEACAM6 CEACAM21 TMEM91 B9D2
GH19J041804 Enhancer 0.3 FANTOM5 0.7 -2.6 -2620 0.4 DMRTC2 CEACAM3 CEACAM4 DEDD2 LYPD4 TMEM91 CEACAM21 B9D2 TGFB1 ARHGEF1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100422623 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC100422623 Gene

Genomic Locations for LOC100422623 Gene
chr19:41,807,111-41,808,033
(GRCh38/hg38)
Size:
923 bases
Orientation:
Plus strand
chr19:42,307,627-42,312,105
(GRCh37/hg19)
Size:
4,479 bases
Orientation:
Plus strand

Genomic View for LOC100422623 Gene

Genes around LOC100422623 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100422623 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100422623 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100422623 Gene

Proteins for LOC100422623 Gene

Post-translational modifications for LOC100422623 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100422623 Gene

Domains & Families for LOC100422623 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100422623 Gene

Function for LOC100422623 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100422623 Gene

Localization for LOC100422623 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100422623 Gene

Pathways & Interactions for LOC100422623 Gene

PathCards logo

SuperPathways for LOC100422623 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100422623 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100422623 Gene

Drugs & Compounds for LOC100422623 Gene

No Compound Related Data Available

Transcripts for LOC100422623 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100422623 Gene

No ASD Table

Relevant External Links for LOC100422623 Gene

GeneLoc Exon Structure for
LOC100422623

No data available for mRNA/cDNA for LOC100422623 Gene

Expression for LOC100422623 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100422623 Gene

Orthologs for LOC100422623 Gene

No data available for Orthologs and Evolution for LOC100422623 Gene

Paralogs for LOC100422623 Gene

No data available for Paralogs for LOC100422623 Gene

Variants for LOC100422623 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100422623 Gene

Disorders for LOC100422623 Gene

No disorders were found for LOC100422623 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100422623 Gene

Publications for LOC100422623 Gene

No publications were found for LOC100422623 Gene.

No data available for Mastermind for LOC100422623 Gene

Products for LOC100422623 Gene

Sources for LOC100422623 Gene