Aliases for LOC100422426 Gene

Aliases for LOC100422426 Gene

  • CASP2 And RIPK1 Domain Containing Adaptor With Death Domain Pseudogene 3
  • CASP2 And RIPK1 Domain Containing Adaptor With Death Domain (CRADD) Pseudogene 5
  • AC117392.1 5

External Ids for LOC100422426 Gene

Previous GeneCards Identifiers for LOC100422426 Gene

  • GC03U901582
  • GC03M156706

Summaries for LOC100422426 Gene

GeneCards Summary for LOC100422426 Gene

LOC100422426 (CASP2 And RIPK1 Domain Containing Adaptor With Death Domain Pseudogene) is a Pseudogene.

Additional gene information for LOC100422426 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100422426 Gene

Genomics for LOC100422426 Gene

GeneHancer (GH) Regulatory Elements for LOC100422426 Gene

Promoters and enhancers for LOC100422426 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J156977 Enhancer 1 Ensembl ENCODE 0.4 +10.2 10211 3 EP300 RELA TRIM22 POLR2A BCL11A CBFB ARNT MEF2B SMARCA5 ASH2L KLF3P2 lnc-TIPARP-4 LINC00886 LEKR1 LOC100422426
GH03J156984 Enhancer 0.5 Ensembl 0.7 +2.8 2811 2.6 NR2F1 NR2F6 CEBPB ID3 SPI1 EZH2 NR2C2 TIPARP TIPARP-AS1 LINC00886 LOC100422426 lnc-TIPARP-4 LEKR1
GH03J157007 Enhancer 0.3 Ensembl 0.4 -19.1 -19089 0.4 GATA3 RF00100-089 RN7SKP177 lnc-TIPARP-5 LOC100422426 LEKR1
GH03J156980 Enhancer 0.2 Ensembl 0.4 +8.1 8111 0.4 LINC00886 LEKR1 lnc-TIPARP-4 LOC100422426
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100422426 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100422426 Gene

Genomic Locations for LOC100422426 Gene
chr3:156,988,117-156,988,712
(GRCh38/hg38)
Size:
596 bases
Orientation:
Minus strand
chr3:156,705,906-156,706,501
(GRCh37/hg19)
Size:
596 bases
Orientation:
Minus strand

Genomic View for LOC100422426 Gene

Genes around LOC100422426 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100422426 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100422426 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100422426 Gene

Proteins for LOC100422426 Gene

Post-translational modifications for LOC100422426 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100422426 Gene

Domains & Families for LOC100422426 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100422426 Gene

Function for LOC100422426 Gene

Phenotypes From GWAS Catalog for LOC100422426 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100422426 Gene

Localization for LOC100422426 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100422426 Gene

Pathways & Interactions for LOC100422426 Gene

PathCards logo

SuperPathways for LOC100422426 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC100422426 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100422426 Gene

Drugs & Compounds for LOC100422426 Gene

No Compound Related Data Available

Transcripts for LOC100422426 Gene

mRNA/cDNA for LOC100422426 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100422426 Gene

No ASD Table

Relevant External Links for LOC100422426 Gene

GeneLoc Exon Structure for
LOC100422426

Expression for LOC100422426 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC100422426 Gene

genes like me logo Genes that share expression patterns with LOC100422426: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100422426 Gene

Orthologs for LOC100422426 Gene

Evolution for LOC100422426 Gene

ENSEMBL:
Gene Tree for LOC100422426 (if available)
TreeFam:
Gene Tree for LOC100422426 (if available)

No data available for Orthologs for LOC100422426 Gene

Paralogs for LOC100422426 Gene

No data available for Paralogs for LOC100422426 Gene

Variants for LOC100422426 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100422426 Gene

Disorders for LOC100422426 Gene

No disorders were found for LOC100422426 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100422426 Gene

Publications for LOC100422426 Gene

No publications were found for LOC100422426 Gene.

No data available for Mastermind for LOC100422426 Gene

Products for LOC100422426 Gene

Sources for LOC100422426 Gene