Aliases for LOC100422408 Gene

Aliases for LOC100422408 Gene

  • LanC Like 3 Pseudogene 3
  • LanC Lantibiotic Synthetase Component C-Like 3 (Bacterial) Pseudogene 3

External Ids for LOC100422408 Gene

Previous GeneCards Identifiers for LOC100422408 Gene

  • GC0XU901652

Summaries for LOC100422408 Gene

GeneCards Summary for LOC100422408 Gene

LOC100422408 (LanC Like 3 Pseudogene) is a Pseudogene.

Additional gene information for LOC100422408 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100422408 Gene

Genomics for LOC100422408 Gene

GeneHancer (GH) Regulatory Elements for LOC100422408 Gene

Promoters and enhancers for LOC100422408 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XJ036985 Promoter 0.6 Ensembl 500.7 +0.5 493 2 CTCF RAD21 EZH2 ENSG00000231069 LOC100422408 ENSG00000223723 PRRG1 LOC441488
GH0XJ036963 Promoter/Enhancer 0.9 FANTOM5 Ensembl 0.4 +22.4 22392 1 RAD21 RXRA MAX HNF4A REST EZH2 HNF4G SP1 YY1 ENSG00000223723 LOC441488 PRRG1 ENSG00000231069 LOC100422408
GH0XJ037000 Enhancer 0.2 Ensembl 0.4 -14.3 -14308 0.4 piR-57460-709 LOC100422408 ENSG00000231069
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100422408 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100422408 Gene

Genomic Locations for LOC100422408 Gene
chrX:36,985,346-36,986,093
(GRCh38/hg38)
Size:
748 bases
Orientation:
Minus strand
chrX:37,003,419-37,004,166
(GRCh37/hg19)
Size:
748 bases
Orientation:
Minus strand

Genomic View for LOC100422408 Gene

Genes around LOC100422408 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100422408 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100422408 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100422408 Gene

Proteins for LOC100422408 Gene

Post-translational modifications for LOC100422408 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100422408 Gene

Domains & Families for LOC100422408 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100422408 Gene

Function for LOC100422408 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100422408 Gene

Localization for LOC100422408 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100422408 Gene

Pathways & Interactions for LOC100422408 Gene

PathCards logo

SuperPathways for LOC100422408 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC100422408 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100422408 Gene

Drugs & Compounds for LOC100422408 Gene

No Compound Related Data Available

Transcripts for LOC100422408 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100422408 Gene

No ASD Table

Relevant External Links for LOC100422408 Gene

GeneLoc Exon Structure for
LOC100422408

No data available for mRNA/cDNA for LOC100422408 Gene

Expression for LOC100422408 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC100422408 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100422408 Gene

This gene is overexpressed in Pituitary (x12.7) and Artery - Aorta (x6.9).
genes like me logo Genes that share expression patterns with LOC100422408: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100422408 Gene

Orthologs for LOC100422408 Gene

No data available for Orthologs and Evolution for LOC100422408 Gene

Paralogs for LOC100422408 Gene

No data available for Paralogs for LOC100422408 Gene

Variants for LOC100422408 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100422408 Gene

Disorders for LOC100422408 Gene

No disorders were found for LOC100422408 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100422408 Gene

Publications for LOC100422408 Gene

No publications were found for LOC100422408 Gene.

No data available for Mastermind for LOC100422408 Gene

Products for LOC100422408 Gene

Sources for LOC100422408 Gene