LOC100422399 Gene (Pseudogene)

Protein Kinase CAMP-Dependent Type II Regulatory Subunit Beta Pseudogene

GC11M059284
GIFtS:
3

Aliases for LOC100422399 Gene

Aliases for LOC100422399 Gene

  • Protein Kinase CAMP-Dependent Type II Regulatory Subunit Beta Pseudogene 3
  • Protein Kinase, CAMP-Dependent, Regulatory Subunit Type II Beta Pseudogene 3
  • Protein Kinase, CAMP-Dependent, Regulatory, Type II, Beta Pseudogene 3

External Ids for LOC100422399 Gene

Previous GeneCards Identifiers for LOC100422399 Gene

  • GC11U901735
  • GC11M055255
  • GC11M058909
  • GC11M059143

Summaries for LOC100422399 Gene

GeneCards Summary for LOC100422399 Gene

LOC100422399 (Protein Kinase CAMP-Dependent Type II Regulatory Subunit Beta Pseudogene) is a Pseudogene.

Additional gene information for LOC100422399 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100422399 Gene

Genomics for LOC100422399 Gene

GeneHancer (GH) Regulatory Elements for LOC100422399 Gene

Promoters and enhancers for LOC100422399 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH11J059141 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 750.6 -1.3 -1273 5.4 SIN3A ZBTB40 CTCF FOXA1 SMARCE1 POLR2A USF2 HDAC2 CREB1 ZNF362 FAM111A ENSG00000255381 FAM111A-DT HSALNG0084390 LOC100422399 lnc-FAM111B-1 lnc-MPEG1-6 PATL1 ENSG00000269570 ENSG00000255139
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100422399 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100422399 Gene

Genomic Locations for LOC100422399 Gene
chr11:59,142,087-59,142,630
(GRCh38/hg38)
Size:
544 bases
Orientation:
Minus strand
chr11:58,909,560-58,910,103
(GRCh37/hg19)
Size:
544 bases
Orientation:
Minus strand

Genomic View for LOC100422399 Gene

Genes around LOC100422399 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100422399 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100422399 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LOC100422399 Gene

Proteins for LOC100422399 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for LOC100422399 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100422399 Gene

Domains & Families for LOC100422399 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100422399 Gene

Function for LOC100422399 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100422399 Gene

Localization for LOC100422399 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100422399 Gene

Pathways & Interactions for LOC100422399 Gene

PathCards logo

SuperPathways for LOC100422399 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100422399 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100422399 Gene

Drugs & Compounds for LOC100422399 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for LOC100422399 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100422399 Gene

No ASD Table

Relevant External Links for LOC100422399 Gene

GeneLoc Exon Structure for
LOC100422399

No data available for mRNA/cDNA for LOC100422399 Gene

Expression for LOC100422399 Gene

Products:

  1. Primer

mRNA differential expression in normal tissues according to GTEx for LOC100422399 Gene

This gene is overexpressed in Prostate (x4.9) and Kidney - Cortex (x4.0).

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100422399 Gene

Orthologs for LOC100422399 Gene

No data available for Orthologs and Evolution for LOC100422399 Gene

Paralogs for LOC100422399 Gene

No data available for Paralogs for LOC100422399 Gene

Variants for LOC100422399 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100422399 Gene

Disorders for LOC100422399 Gene

No disorders were found for LOC100422399 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100422399 Gene

Publications for LOC100422399 Gene

No publications were found for LOC100422399 Gene.

No data available for External Links for LOC100422399 Gene

Products for LOC100422399 Gene

Sources for LOC100422399 Gene