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Aliases for LOC100422032 Gene

Aliases for LOC100422032 Gene

  • Intraflagellar Transport 80 Homolog (Chlamydomonas) Pseudogene 3
  • AC010867.1 5

External Ids for LOC100422032 Gene

Previous GeneCards Identifiers for LOC100422032 Gene

  • GC15U901219
  • GC15M054340
  • GC15M054151
  • GC15M054557
  • GC15M054558
  • GC15M054931
  • GC15M055371
  • GC15M055819
  • GC15M056256
  • GC15M056702

Summaries for LOC100422032 Gene

GeneCards Summary for LOC100422032 Gene

LOC100422032 (Intraflagellar Transport 80 Homolog (Chlamydomonas) Pseudogene) is a Pseudogene.

Additional gene information for LOC100422032 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100422032 Gene

Genomics for LOC100422032 Gene

GeneHancer (GH) Regulatory Elements for LOC100422032 Gene

Promoters and enhancers for LOC100422032 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J053978 Enhancer 0.7 Ensembl ENCODE 0.2 +72.3 72277 0.8 HDGF SMARCA5 MXI1 ZNF687 IKZF1 MLLT1 ENSG00000259669 UNC13C GC15P053932 LOC100422032
GH15J054033 Enhancer 0.2 ENCODE 0.4 +17.3 17338 0.2 LOC100422032 UNC13C
GH15J053982 Enhancer 0.3 FANTOM5 0.2 +68.5 68492 0.2 ZNF24 ENSG00000259669 UNC13C LOC100422032
GH15J054100 Enhancer 0.2 FANTOM5 0.2 -49.3 -49275 0.1 UNC13C GC15P054127 LOC100422032
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100422032 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100422032 Gene

Genomic Locations for LOC100422032 Gene
chr15:54,048,179-54,050,877
(GRCh38/hg38)
Size:
2,699 bases
Orientation:
Minus strand
chr15:54,340,376-54,343,074
(GRCh37/hg19)
Size:
2,699 bases
Orientation:
Minus strand

Genomic View for LOC100422032 Gene

Genes around LOC100422032 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100422032 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100422032 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100422032 Gene

Proteins for LOC100422032 Gene

Post-translational modifications for LOC100422032 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100422032 Gene

Domains & Families for LOC100422032 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100422032 Gene

Function for LOC100422032 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100422032 Gene

Localization for LOC100422032 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100422032 Gene

Pathways & Interactions for LOC100422032 Gene

SuperPathways for LOC100422032 Gene

No Data Available

Interacting Proteins for LOC100422032 Gene

Gene Ontology (GO) - Biological Process for LOC100422032 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100422032 Gene

Drugs & Compounds for LOC100422032 Gene

No Compound Related Data Available

Transcripts for LOC100422032 Gene

mRNA/cDNA for LOC100422032 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100422032 Gene

No ASD Table

Relevant External Links for LOC100422032 Gene

GeneLoc Exon Structure for
LOC100422032

Expression for LOC100422032 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100422032 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100422032 Gene

This gene is overexpressed in Brain - Cerebellum (x30.5) and Brain - Cerebellar Hemisphere (x14.3).
genes like me logo Genes that share expression patterns with LOC100422032: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100422032 Gene

Orthologs for LOC100422032 Gene

Evolution for LOC100422032 Gene

ENSEMBL:
Gene Tree for LOC100422032 (if available)
TreeFam:
Gene Tree for LOC100422032 (if available)

No data available for Orthologs for LOC100422032 Gene

Paralogs for LOC100422032 Gene

No data available for Paralogs for LOC100422032 Gene

Variants for LOC100422032 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100422032 Gene

Disorders for LOC100422032 Gene

No disorders were found for LOC100422032 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100422032 Gene

Publications for LOC100422032 Gene

No publications were found for LOC100422032 Gene.

Products for LOC100422032 Gene

Sources for LOC100422032 Gene

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