Aliases for LOC100421976 Gene

Aliases for LOC100421976 Gene

  • Interferon Stimulated Exonuclease Gene 20 Like 2 Pseudogene 3
  • Interferon Stimulated Exonuclease Gene 20kDa Like 2 Pseudogene 3

External Ids for LOC100421976 Gene

Previous GeneCards Identifiers for LOC100421976 Gene

  • GC11U901555
  • GC11M113692
  • GC11M113693

Summaries for LOC100421976 Gene

GeneCards Summary for LOC100421976 Gene

LOC100421976 (Interferon Stimulated Exonuclease Gene 20 Like 2 Pseudogene) is a Pseudogene.

Additional gene information for LOC100421976 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100421976 Gene

Genomics for LOC100421976 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC100421976 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J113839 Enhancer 0.8 Ensembl ENCODE 0.4 -17.5 -17527 2.1 RFX1 ZNF740 IKZF2 TRIM22 PKNOX1 EED DPF2 RELB RUNX3 BCL11A ATF4P4 RF00026-204 RNU6-1107P LOC100421976 USP28 CLDN25
GH11J113847 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.3 -27.3 -27261 4.7 KDM1A POLR2A SCRT2 USF1 ZNF146 NANOG SP1 POU5F1 CHD2 LRRC37A13P ATF4P4 USP28 HTR3A DRD2 RF00026-204 RNU6-1107P LOC100421976 lnc-USP28-3 CLDN25
GH11J113854 Enhancer 1 Ensembl ENCODE dbSUPER 0.3 -37.4 -37399 9.8 SOX13 TCF7 EZH2 FOXA2 MAFF USF1 CREB1 MAFK ZBTB17 ZFHX2 RF00026-204 RNU6-1107P ATF4P4 NNMT HTR3A USP28 LRRC37A13P DRD2 lnc-USP28-3 LOC100421976
GH11J113837 Enhancer 0.4 FANTOM5 0.4 -16.0 -16046 0.8 ZNF740 MAFG NFIC ATF4P4 CLDN25 DRD2 LOC100421976 RF00026-204 RNU6-1107P USP28
GH11J113842 Enhancer 0.3 Ensembl 0.4 -20.2 -20199 0.2 WT1 MLLT1 RF00026-204 RNU6-1107P LOC100421976 USP28 CLDN25
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100421976 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC100421976 Gene

Genomic Locations for LOC100421976 Gene
chr11:113,820,414-113,821,902
(GRCh38/hg38)
Size:
1,489 bases
Orientation:
Minus strand
chr11:113,691,578-113,692,607
(GRCh37/hg19)
Size:
1,030 bases
Orientation:
Minus strand

Genomic View for LOC100421976 Gene

Genes around LOC100421976 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100421976 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100421976 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100421976 Gene

Proteins for LOC100421976 Gene

Post-translational modifications for LOC100421976 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100421976 Gene

Domains & Families for LOC100421976 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100421976 Gene

Function for LOC100421976 Gene

Phenotypes From GWAS Catalog for LOC100421976 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100421976 Gene

Localization for LOC100421976 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100421976 Gene

Pathways & Interactions for LOC100421976 Gene

PathCards logo

SuperPathways for LOC100421976 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100421976 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100421976 Gene

Drugs & Compounds for LOC100421976 Gene

No Compound Related Data Available

Transcripts for LOC100421976 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100421976 Gene

No ASD Table

Relevant External Links for LOC100421976 Gene

GeneLoc Exon Structure for
LOC100421976

No data available for mRNA/cDNA for LOC100421976 Gene

Expression for LOC100421976 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC100421976 Gene

genes like me logo Genes that share expression patterns with LOC100421976: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100421976 Gene

Orthologs for LOC100421976 Gene

No data available for Orthologs and Evolution for LOC100421976 Gene

Paralogs for LOC100421976 Gene

No data available for Paralogs for LOC100421976 Gene

Variants for LOC100421976 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100421976 Gene

Disorders for LOC100421976 Gene

No disorders were found for LOC100421976 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100421976 Gene

Publications for LOC100421976 Gene

No publications were found for LOC100421976 Gene.

No data available for Mastermind for LOC100421976 Gene

Products for LOC100421976 Gene

Sources for LOC100421976 Gene