Aliases for LOC100421894 Gene

Aliases for LOC100421894 Gene

  • Exportin For TRNA Pseudogene 3

External Ids for LOC100421894 Gene

Previous GeneCards Identifiers for LOC100421894 Gene

  • GC18U900604
  • GC18M074597
  • GC18M076886

Summaries for LOC100421894 Gene

GeneCards Summary for LOC100421894 Gene

LOC100421894 (Exportin For TRNA Pseudogene) is a Pseudogene.

Additional gene information for LOC100421894 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100421894 Gene

Genomics for LOC100421894 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC100421894 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J076888 Enhancer 0.2 FANTOM5 250.7 -1.7 -1704 0.3 ENSG00000265261 LOC100421894 lnc-MBP-6 piR-56692-015 RNU6-346P MK280607-009 ZNF236 MBP
GH18J076886 Enhancer 0.2 ENCODE 250.7 +0.8 820 0 LOC100421894 piR-56692-015 ENSG00000265261 lnc-MBP-6 HSALNG0122597 ZNF236 MBP
GH18J076875 Enhancer 0.6 ENCODE 0.4 +11.5 11540 0.2 TBP CTCF BHLHE40 TRIM22 RXRA SMC3 RAD21 RXRB PPARG XRCC5 RNU6-346P LOC100421894 HSALNG0122597 ZNF236 MBP
GH18J076876 Enhancer 0.5 ENCODE 0.4 +11.8 11790 0.2 TBP CTCF TRIM22 RAD21 RXRB XRCC5 PRDM1 ZNF654 RNU6-346P LOC100421894 HSALNG0122597 ZNF236 MBP
GH18J076858 Enhancer 0.5 Ensembl 0.3 +27.3 27290 0.4 TCF7 RAD51 ZNF687 EED IKZF2 RUNX3 HSALNG0122597 ZNF236 RNU6-346P LOC100421894 MBP
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100421894 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC100421894 Gene

Latest Assembly
chr18:76,884,935-76,887,090
(GRCh38/hg38)
Size:
2,156 bases
Orientation:
Minus strand

Previous Assembly
chr18:74,596,891-74,599,046
(GRCh37/hg19 by Entrez Gene)
Size:
2,156 bases
Orientation:
Minus strand

Genomic View for LOC100421894 Gene

Genes around LOC100421894 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100421894 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100421894 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100421894 Gene

Proteins for LOC100421894 Gene

Post-translational modifications for LOC100421894 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100421894 Gene

Domains & Families for LOC100421894 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100421894 Gene

Function for LOC100421894 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100421894 Gene

Localization for LOC100421894 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100421894 Gene

Pathways & Interactions for LOC100421894 Gene

PathCards logo

SuperPathways for LOC100421894 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100421894 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100421894 Gene

Drugs & Compounds for LOC100421894 Gene

No Compound Related Data Available

Transcripts for LOC100421894 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100421894 Gene

No ASD Table

Relevant External Links for LOC100421894 Gene

GeneLoc Exon Structure for
LOC100421894

No data available for mRNA/cDNA for LOC100421894 Gene

Expression for LOC100421894 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC100421894 Gene

genes like me logo Genes that share expression patterns with LOC100421894: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100421894 Gene

Orthologs for LOC100421894 Gene

No data available for Orthologs and Evolution for LOC100421894 Gene

Paralogs for LOC100421894 Gene

No data available for Paralogs for LOC100421894 Gene

Variants for LOC100421894 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100421894 Gene

Disorders for LOC100421894 Gene

No disorders were found for LOC100421894 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100421894 Gene

Publications for LOC100421894 Gene

No publications were found for LOC100421894 Gene.

No data available for Mastermind for LOC100421894 Gene

Products for LOC100421894 Gene

Sources for LOC100421894 Gene