Aliases for LOC100421471 Gene

Aliases for LOC100421471 Gene

  • NSE4 Homolog A, SMC5-SMC6 Complex Component Pseudogene 3
  • NSE4 Homolog, SMC5-SMC6 Complex Component A Pseudogene 3
  • Non-SMC Element 4 Homolog A (S. Cerevisiae) Pseudogene 3

External Ids for LOC100421471 Gene

Previous GeneCards Identifiers for LOC100421471 Gene

  • GC01U902872
  • GC01P182703
  • GC01P182733

Summaries for LOC100421471 Gene

GeneCards Summary for LOC100421471 Gene

LOC100421471 (NSE4 Homolog A, SMC5-SMC6 Complex Component Pseudogene) is a Pseudogene.

Additional gene information for LOC100421471 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100421471 Gene

Genomics for LOC100421471 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC100421471 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J182732 Enhancer 0.4 Ensembl 600.7 -1.8 -1828 1.2 FOXA1 ZSCAN4 GATA3 JUND ENSG00000271269 LOC100421471 lnc-NPL-4 RGS8 LINC01688 RGS16
GH01J182738 Enhancer 1 Ensembl ENCODE CraniofacialAtlas 0.4 +5.3 5349 1.6 PRDM10 RFX1 ZNF143 PKNOX1 POLR2A NR2C1 RFX3 MGA SIN3A DPF2 HSALNG0008938 RGS16 LOC100421471 RGS8
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100421471 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC100421471 Gene

Genomic Locations for LOC100421471 Gene
chr1:182,734,229-182,734,751
(GRCh38/hg38)
Size:
523 bases
Orientation:
Plus strand
chr1:182,702,927-182,703,914
(GRCh37/hg19)
Size:
988 bases
Orientation:
Plus strand

Genomic View for LOC100421471 Gene

Genes around LOC100421471 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100421471 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100421471 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100421471 Gene

Proteins for LOC100421471 Gene

Post-translational modifications for LOC100421471 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100421471 Gene

Domains & Families for LOC100421471 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100421471 Gene

Function for LOC100421471 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100421471 Gene

Localization for LOC100421471 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100421471 Gene

Pathways & Interactions for LOC100421471 Gene

PathCards logo

SuperPathways for LOC100421471 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100421471 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100421471 Gene

Drugs & Compounds for LOC100421471 Gene

No Compound Related Data Available

Transcripts for LOC100421471 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100421471 Gene

No ASD Table

Relevant External Links for LOC100421471 Gene

GeneLoc Exon Structure for
LOC100421471

No data available for mRNA/cDNA for LOC100421471 Gene

Expression for LOC100421471 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC100421471 Gene

genes like me logo Genes that share expression patterns with LOC100421471: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100421471 Gene

Orthologs for LOC100421471 Gene

No data available for Orthologs and Evolution for LOC100421471 Gene

Paralogs for LOC100421471 Gene

No data available for Paralogs for LOC100421471 Gene

Variants for LOC100421471 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100421471 Gene

Disorders for LOC100421471 Gene

No disorders were found for LOC100421471 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100421471 Gene

Publications for LOC100421471 Gene

No publications were found for LOC100421471 Gene.

No data available for Mastermind for LOC100421471 Gene

Products for LOC100421471 Gene

Sources for LOC100421471 Gene