Aliases for LOC100421446 Gene

Aliases for LOC100421446 Gene

  • Nuclear Receptor Binding SET Domain Protein 3 Pseudogene 3
  • Wolf-Hirschhorn Syndrome Candidate 1-Like 1 Pseudogene 3

External Ids for LOC100421446 Gene

Previous GeneCards Identifiers for LOC100421446 Gene

  • GC08U901394
  • GC08P011856

Summaries for LOC100421446 Gene

GeneCards Summary for LOC100421446 Gene

LOC100421446 (Nuclear Receptor Binding SET Domain Protein 3 Pseudogene) is a Pseudogene. Diseases associated with LOC100421446 include Wolf-Hirschhorn Syndrome.

Additional gene information for LOC100421446 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100421446 Gene

Genomics for LOC100421446 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC100421446 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J011999 Enhancer 0.2 Ensembl 250.7 +2.0 1971 0.4 DEFB134 ENSG00000255174 HSALNG0063476 LOC100421446 LOC105379245 lnc-DEFB135-1 OR7E160P DEFB130B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100421446 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC100421446 Gene

Latest Assembly
chr8:11,998,830-11,999,505
(GRCh38/hg38)
Size:
676 bases
Orientation:
Plus strand

Previous Assembly
chr8:11,856,339-11,857,014
(GRCh37/hg19 by Entrez Gene)
Size:
676 bases
Orientation:
Plus strand

Alternative Locations (GRCh38/hg38)

  • chr8(PATCHES):1,348,513-1,349,188 (-)

Genomic View for LOC100421446 Gene

Genes around LOC100421446 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100421446 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100421446 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100421446 Gene

Proteins for LOC100421446 Gene

Post-translational modifications for LOC100421446 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100421446 Gene

Domains & Families for LOC100421446 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100421446 Gene

Function for LOC100421446 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100421446 Gene

Localization for LOC100421446 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100421446 Gene

Pathways & Interactions for LOC100421446 Gene

PathCards logo

SuperPathways for LOC100421446 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100421446 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100421446 Gene

Drugs & Compounds for LOC100421446 Gene

No Compound Related Data Available

Transcripts for LOC100421446 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100421446 Gene

No ASD Table

Relevant External Links for LOC100421446 Gene

GeneLoc Exon Structure for
LOC100421446

No data available for mRNA/cDNA for LOC100421446 Gene

Expression for LOC100421446 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC100421446 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100421446 Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x13.1) and Brain - Cerebellum (x8.0).
genes like me logo Genes that share expression patterns with LOC100421446: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100421446 Gene

Orthologs for LOC100421446 Gene

No data available for Orthologs and Evolution for LOC100421446 Gene

Paralogs for LOC100421446 Gene

No data available for Paralogs for LOC100421446 Gene

Variants for LOC100421446 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100421446 Gene

Disorders for LOC100421446 Gene

MalaCards: The human disease database

(1) MalaCards diseases for LOC100421446 Gene - From: GCD

Disorder Aliases PubMed IDs
wolf-hirschhorn syndrome
  • whs
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with LOC100421446: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100421446 Gene

Publications for LOC100421446 Gene

No publications were found for LOC100421446 Gene.

No data available for Mastermind for LOC100421446 Gene

Products for LOC100421446 Gene

Sources for LOC100421446 Gene