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Aliases for LOC100421419 Gene

Aliases for LOC100421419 Gene

  • Protein Phosphatase 4 Regulatory Subunit 2 Pseudogene 3
  • AC021087.2 5

External Ids for LOC100421419 Gene

Previous GeneCards Identifiers for LOC100421419 Gene

  • GC05U901426

Summaries for LOC100421419 Gene

GeneCards Summary for LOC100421419 Gene

LOC100421419 (Protein Phosphatase 4 Regulatory Subunit 2 Pseudogene) is a Pseudogene.

Additional gene information for LOC100421419 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100421419 Gene

Genomics for LOC100421419 Gene

GeneHancer (GH) Regulatory Elements for LOC100421419 Gene

Promoters and enhancers for LOC100421419 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I001199 Promoter/Enhancer 2 EPDnew FANTOM5 ENCODE dbSUPER 32.7 -912.1 -912105 6.5 HDGF PKNOX1 ARNT ARID4B ZBTB7B POLR2B ZNF766 E2F8 MCM3 MCM5 SLC6A19 BRD9 LOC100132773 LOC100421419 SLC6A18 EXOC3 CTD-3080P12.3 ENSG00000271119 CCDC127 ENSG00000250173
GH05I001151 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 23.3 -862.7 -862721 2.6 PKNOX1 NFIB ZSCAN4 NEUROD1 BMI1 ZBTB7B THRB ZNF207 EGR2 MCM3 LOC100421419 BRD9 LOC100132773 CTD-3080P12.3 SLC6A19 ENSG00000250173 SLC6A18 TERT TRIP13 SLC6A3
GH05I000692 Promoter/Enhancer 2.2 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 12.5 -402.8 -402843 1.9 ZSCAN5A KLF1 KLF17 SIN3A ZIC2 BCL11B ZNF335 GLIS2 POLR2A PATZ1 TPPP LOC101929898 LOC100421419 LOC100132773 ENSG00000271781 BRD9 PIR34715
GH05I000187 Promoter/Enhancer 2.1 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 12.7 +100.1 100078 5.6 HDGF PKNOX1 ARID4B SIN3A ZNF2 ZBTB7B YY1 GLIS2 ZNF143 KLF7 LRRC14B LOC100421419 SLC9A3-AS1 HRAT5 SDHA CCDC127 PLEKHG4B BRD9 EXOC3 PDCD6
GH05I000668 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 14.1 -382.4 -382385 8 HDGF HNRNPUL1 PKNOX1 SMAD1 ATF1 FOXA2 ARID4B NEUROD1 SIN3A GLI4 EXOC3 LOC100421419 ENSG00000271781 BRD9P2 ZDHHC11B BRD9 LOC100132773 TPPP CEP72 SLC9A3-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100421419 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100421419 Gene

Genomic Locations for LOC100421419 Gene
chr5:288,693-290,391
(GRCh38/hg38)
Size:
1,699 bases
Orientation:
Minus strand
chr5:288,808-290,506
(GRCh37/hg19)

Genomic View for LOC100421419 Gene

Genes around LOC100421419 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100421419 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100421419 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100421419 Gene

Proteins for LOC100421419 Gene

Post-translational modifications for LOC100421419 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100421419 Gene

Domains & Families for LOC100421419 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100421419 Gene

Function for LOC100421419 Gene

Phenotypes From GWAS Catalog for LOC100421419 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100421419 Gene

Localization for LOC100421419 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100421419 Gene

Pathways & Interactions for LOC100421419 Gene

SuperPathways for LOC100421419 Gene

No Data Available

Interacting Proteins for LOC100421419 Gene

Gene Ontology (GO) - Biological Process for LOC100421419 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100421419 Gene

Drugs & Compounds for LOC100421419 Gene

No Compound Related Data Available

Transcripts for LOC100421419 Gene

mRNA/cDNA for LOC100421419 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100421419 Gene

No ASD Table

Relevant External Links for LOC100421419 Gene

GeneLoc Exon Structure for
LOC100421419

Expression for LOC100421419 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100421419 Gene

genes like me logo Genes that share expression patterns with LOC100421419: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100421419 Gene

Orthologs for LOC100421419 Gene

Evolution for LOC100421419 Gene

ENSEMBL:
Gene Tree for LOC100421419 (if available)
TreeFam:
Gene Tree for LOC100421419 (if available)

No data available for Orthologs for LOC100421419 Gene

Paralogs for LOC100421419 Gene

No data available for Paralogs for LOC100421419 Gene

Variants for LOC100421419 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100421419 Gene

Disorders for LOC100421419 Gene

No disorders were found for LOC100421419 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100421419 Gene

Publications for LOC100421419 Gene

No publications were found for LOC100421419 Gene.

Products for LOC100421419 Gene

Sources for LOC100421419 Gene

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