Aliases for LOC100421414 Gene

Aliases for LOC100421414 Gene

  • Glial Cells Missing Transcription Factor 1 Pseudogene 3
  • Glial Cells Missing Homolog 1 (Drosophila) Pseudogene 3

External Ids for LOC100421414 Gene

Previous GeneCards Identifiers for LOC100421414 Gene

  • GC19U901335
  • GC19M033314

Summaries for LOC100421414 Gene

GeneCards Summary for LOC100421414 Gene

LOC100421414 (Glial Cells Missing Transcription Factor 1 Pseudogene) is a Pseudogene.

Additional gene information for LOC100421414 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100421414 Gene

Genomics for LOC100421414 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC100421414 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J032825 Enhancer 0.8 Ensembl ENCODE CraniofacialAtlas 600.7 -0.4 -395 1.8 RNF2 USF1 NR2F2 CTCF REST L3MBTL2 ATF1 ENSG00000267245 LOC100421414 lnc-SLC7A9-1 SLC7A9 ENSG00000267475 PDCD5 NUDT19 piR-39977 TDRD12
GH19J032816 Enhancer 0.8 Ensembl ENCODE 0.4 +7.6 7604 1.4 ZIC2 CEBPB YY1 JUN THRB ETV4 ZNF48 HLF NR2F6 BACH1 SLC7A9 ENSG00000267475 ANKRD27 ENSG00000267245 LOC100421414 lnc-SLC7A9-1 piR-52994 TDRD12
GH19J032819 Enhancer 0.5 Ensembl 0.7 +4.2 4204 0.6 PRDM10 ZNF600 ZBTB48 EGR2 IKZF2 ANKRD27 ENSG00000267245 LOC100421414 lnc-SLC7A9-1 piR-52994 SLC7A9 TDRD12
GH19J032808 Enhancer 0.5 Ensembl 0.4 +14.9 14904 0.8 RNF2 SCRT2 ZNF248 ZBTB17 ZNF335 piR-52994 LOC100421414 ENSG00000267245 lnc-SLC7A9-1 SLC7A9 TDRD12
GH19J032813 Enhancer 0.4 Ensembl 0.4 +10.5 10504 0.4 USF1 VEZF1 ZNF354B USF2 NUDT19 GPATCH1 CEP89 ZNF507 SLC7A9 LOC100421414 ENSG00000267245 lnc-SLC7A9-1 piR-52994 TDRD12
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100421414 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC100421414 Gene

Genomic Locations for LOC100421414 Gene
chr19:32,823,436-32,824,505
(GRCh38/hg38)
Size:
1,070 bases
Orientation:
Minus strand
chr19:33,314,342-33,315,411
(GRCh37/hg19)
Size:
1,070 bases
Orientation:
Minus strand

Genomic View for LOC100421414 Gene

Genes around LOC100421414 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100421414 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100421414 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100421414 Gene

Proteins for LOC100421414 Gene

Post-translational modifications for LOC100421414 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100421414 Gene

Domains & Families for LOC100421414 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100421414 Gene

Function for LOC100421414 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100421414 Gene

Localization for LOC100421414 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100421414 Gene

Pathways & Interactions for LOC100421414 Gene

PathCards logo

SuperPathways for LOC100421414 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100421414 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100421414 Gene

Drugs & Compounds for LOC100421414 Gene

No Compound Related Data Available

Transcripts for LOC100421414 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100421414 Gene

No ASD Table

Relevant External Links for LOC100421414 Gene

GeneLoc Exon Structure for
LOC100421414

No data available for mRNA/cDNA for LOC100421414 Gene

Expression for LOC100421414 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC100421414 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100421414 Gene

This gene is overexpressed in Small Intestine - Terminal Ileum (x30.1).
genes like me logo Genes that share expression patterns with LOC100421414: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100421414 Gene

Orthologs for LOC100421414 Gene

No data available for Orthologs and Evolution for LOC100421414 Gene

Paralogs for LOC100421414 Gene

No data available for Paralogs for LOC100421414 Gene

Variants for LOC100421414 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100421414 Gene

Disorders for LOC100421414 Gene

No disorders were found for LOC100421414 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100421414 Gene

Publications for LOC100421414 Gene

No publications were found for LOC100421414 Gene.

No data available for Mastermind for LOC100421414 Gene

Products for LOC100421414 Gene

Sources for LOC100421414 Gene