Aliases for LOC100421246 Gene

Aliases for LOC100421246 Gene

  • Double PHD Fingers 2 Pseudogene 3
  • D4, Zinc And Double PHD Fingers Family 2 (DPF2) Pseudogene 5
  • D4, Zinc And Double PHD Fingers Family 2 Pseudogene 3
  • AL137222.1 5

External Ids for LOC100421246 Gene

Previous GeneCards Identifiers for LOC100421246 Gene

  • GC06U902012
  • GC06M131505

Summaries for LOC100421246 Gene

GeneCards Summary for LOC100421246 Gene

LOC100421246 (Double PHD Fingers 2 Pseudogene) is a Pseudogene.

Additional gene information for LOC100421246 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100421246 Gene

Genomics for LOC100421246 Gene

GeneHancer (GH) Regulatory Elements for LOC100421246 Gene

Promoters and enhancers for LOC100421246 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J131199 Promoter/Enhancer 1.1 Ensembl ENCODE 0.4 -14.9 -14903 2.1 CTCF SIN3A MEF2C RCOR1 TGIF2 RAD21 TRIM22 CBFB ZNF384 SMC3 lnc-EPB41L2-2 LOC100421246 piR-58308-309 AKAP7
GH06J131182 Enhancer 0.4 ENCODE 0.7 +2.3 2297 1.3 CTCF TEAD4 SMC3 RAD21 LOC100421246 lnc-EPB41L2-2 lnc-EPB41L2-1 AKAP7
GH06J131206 Enhancer 0.6 FANTOM5 Ensembl 0.4 -19.5 -19515 4 FOXA2 SMC3 CTCF HNF4A RAD21 LOC100421246 lnc-EPB41L2-2 piR-58308-309 AKAP7
GH06J131216 Enhancer 0.8 Ensembl ENCODE 0.3 -30.7 -30715 0.8 NR2F2 ZBTB33 JUND RAD21 RXRA GATA2 MAX HNF4A REST FOXA1 piR-58308-309 LOC100421246 lnc-EPB41L2-2 AKAP7
GH06J131172 Enhancer 0.4 Ensembl 0.4 +13.0 12986 0.2 FOS SCRT2 CEBPB lnc-EPB41L2-1 lnc-EPB41L2-2 LOC100421246 AKAP7
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100421246 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100421246 Gene

Genomic Locations for LOC100421246 Gene
chr6:131,184,325-131,185,486
(GRCh38/hg38)
Size:
1,162 bases
Orientation:
Minus strand
chr6:131,505,465-131,506,626
(GRCh37/hg19)
Size:
1,162 bases
Orientation:
Minus strand

Genomic View for LOC100421246 Gene

Genes around LOC100421246 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100421246 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100421246 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100421246 Gene

Proteins for LOC100421246 Gene

Post-translational modifications for LOC100421246 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100421246 Gene

Domains & Families for LOC100421246 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100421246 Gene

Function for LOC100421246 Gene

Phenotypes From GWAS Catalog for LOC100421246 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100421246 Gene

Localization for LOC100421246 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100421246 Gene

Pathways & Interactions for LOC100421246 Gene

PathCards logo

SuperPathways for LOC100421246 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC100421246 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100421246 Gene

Drugs & Compounds for LOC100421246 Gene

No Compound Related Data Available

Transcripts for LOC100421246 Gene

mRNA/cDNA for LOC100421246 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100421246 Gene

No ASD Table

Relevant External Links for LOC100421246 Gene

GeneLoc Exon Structure for
LOC100421246

Expression for LOC100421246 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC100421246 Gene

genes like me logo Genes that share expression patterns with LOC100421246: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100421246 Gene

Orthologs for LOC100421246 Gene

Evolution for LOC100421246 Gene

ENSEMBL:
Gene Tree for LOC100421246 (if available)
TreeFam:
Gene Tree for LOC100421246 (if available)

No data available for Orthologs for LOC100421246 Gene

Paralogs for LOC100421246 Gene

No data available for Paralogs for LOC100421246 Gene

Variants for LOC100421246 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100421246 Gene

Disorders for LOC100421246 Gene

No disorders were found for LOC100421246 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100421246 Gene

Publications for LOC100421246 Gene

No publications were found for LOC100421246 Gene.

No data available for Mastermind for LOC100421246 Gene

Products for LOC100421246 Gene

Sources for LOC100421246 Gene