Aliases for LOC100421161 Gene

Aliases for LOC100421161 Gene

  • Ependymin Related 1 Pseudogene 3
  • Ependymin Related Protein 1 Pseudogene 3

External Ids for LOC100421161 Gene

Previous GeneCards Identifiers for LOC100421161 Gene

  • GC08U901374
  • GC08M024998

Summaries for LOC100421161 Gene

GeneCards Summary for LOC100421161 Gene

LOC100421161 (Ependymin Related 1 Pseudogene) is a Pseudogene.

Additional gene information for LOC100421161 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100421161 Gene

Genomics for LOC100421161 Gene

GeneHancer (GH) Regulatory Elements for LOC100421161 Gene

Promoters and enhancers for LOC100421161 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J025140 Enhancer 0.3 FANTOM5 750.6 +0.8 845 0.3 GATA3 ENSG00000253670 LOC100421161 lnc-NEFL-5 piR-53431-640
GH08J025112 Enhancer 0.2 ENCODE 0.3 +28.6 28588 1.2 NEFM ENSG00000253535 DOCK5 piR-53431-640 LOC100421161
GH08J025104 Enhancer 0.2 ENCODE 0.3 +37.5 37529 0.6 piR-43099-563 piR-31432-631 piR-53431-640 piR-48591-016 piR-55650-611 LOC100421161
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100421161 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100421161 Gene

Genomic Locations for LOC100421161 Gene
chr8:25,141,397-25,141,922
(GRCh38/hg38)
Size:
526 bases
Orientation:
Minus strand
chr8:24,998,909-24,999,483
(GRCh37/hg19)
Size:
575 bases
Orientation:
Minus strand

Genomic View for LOC100421161 Gene

Genes around LOC100421161 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100421161 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100421161 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100421161 Gene

Proteins for LOC100421161 Gene

Post-translational modifications for LOC100421161 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100421161 Gene

Domains & Families for LOC100421161 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100421161 Gene

Function for LOC100421161 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100421161 Gene

Localization for LOC100421161 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100421161 Gene

Pathways & Interactions for LOC100421161 Gene

PathCards logo

SuperPathways for LOC100421161 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100421161 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100421161 Gene

Drugs & Compounds for LOC100421161 Gene

No Compound Related Data Available

Transcripts for LOC100421161 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100421161 Gene

No ASD Table

Relevant External Links for LOC100421161 Gene

GeneLoc Exon Structure for
LOC100421161

No data available for mRNA/cDNA for LOC100421161 Gene

Expression for LOC100421161 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100421161 Gene

genes like me logo Genes that share expression patterns with LOC100421161: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100421161 Gene

Orthologs for LOC100421161 Gene

No data available for Orthologs and Evolution for LOC100421161 Gene

Paralogs for LOC100421161 Gene

No data available for Paralogs for LOC100421161 Gene

Variants for LOC100421161 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100421161 Gene

Disorders for LOC100421161 Gene

No disorders were found for LOC100421161 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100421161 Gene

Publications for LOC100421161 Gene

  1. Identification and characterization of a novel family of mammalian ependymin-related proteins (MERPs) in hematopoietic, nonhematopoietic, and malignant tissues. (PMID: 11749721) Apostolopoulos J … Kirkland MA (DNA and cell biology 2001) 3 56

No data available for External Links for LOC100421161 Gene

Products for LOC100421161 Gene

Sources for LOC100421161 Gene