Aliases for LOC100421064 Gene

Aliases for LOC100421064 Gene

  • Sushi, Nidogen And EGF Like Domains 1 Pseudogene 3

External Ids for LOC100421064 Gene

Previous GeneCards Identifiers for LOC100421064 Gene

  • GC19U901334
  • GC19P035566

Summaries for LOC100421064 Gene

GeneCards Summary for LOC100421064 Gene

LOC100421064 (Sushi, Nidogen And EGF Like Domains 1 Pseudogene) is a Pseudogene.

Additional gene information for LOC100421064 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100421064 Gene

Genomics for LOC100421064 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC100421064 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J035074 Enhancer 0.4 Ensembl 600.7 -1.1 -1097 1 ZNF776 ZNF366 ZNF202 ZNF544 LOC100421064 TMEM147-AS1 HAUS5 ZNF599 KMT2B PROSER3 FXYD3 HPN LSM14A HPN-AS1
GH19J035066 Enhancer 1.5 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 0.4 -7.8 -7760 3.2 CEBPG GATAD2A CTCF ZNF629 TFE3 KDM1A ZNF692 JUND GABPA PRDM1 HPN TMEM147-AS1 SCN1B LSM14A RBM42 ENSG00000267049 KMT2B HAUS5 ZBTB32 ZNF599
GH19J035064 Enhancer 0.7 Ensembl 0.4 -11.8 -11797 0.8 ZNF629 JUND PRDM1 SCRT2 NFE2 HDAC2 JUN FOS ATF2 FOSL1 piR-61945-252 LOC100421064 HPN ENSG00000285526 HPN-AS1
GH19J035069 Enhancer 0.2 Ensembl 0.4 -5.8 -5772 0.3 ENSG00000179066 HPN-AS1 FXYD3 HPN SCN1B USF2 FAM187B HAMP ENSG00000233214 DMKN
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100421064 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC100421064 Gene

Genomic Locations for LOC100421064 Gene
chr19:35,075,798-35,076,483
(GRCh38/hg38)
Size:
686 bases
Orientation:
Plus strand
chr19:35,566,702-35,567,387
(GRCh37/hg19)
Size:
686 bases
Orientation:
Plus strand

Genomic View for LOC100421064 Gene

Genes around LOC100421064 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100421064 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100421064 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100421064 Gene

Proteins for LOC100421064 Gene

Post-translational modifications for LOC100421064 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100421064 Gene

Domains & Families for LOC100421064 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100421064 Gene

Function for LOC100421064 Gene

Phenotypes From GWAS Catalog for LOC100421064 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100421064 Gene

Localization for LOC100421064 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100421064 Gene

Pathways & Interactions for LOC100421064 Gene

PathCards logo

SuperPathways for LOC100421064 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100421064 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100421064 Gene

Drugs & Compounds for LOC100421064 Gene

No Compound Related Data Available

Transcripts for LOC100421064 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100421064 Gene

No ASD Table

Relevant External Links for LOC100421064 Gene

GeneLoc Exon Structure for
LOC100421064

No data available for mRNA/cDNA for LOC100421064 Gene

Expression for LOC100421064 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100421064 Gene

Orthologs for LOC100421064 Gene

No data available for Orthologs and Evolution for LOC100421064 Gene

Paralogs for LOC100421064 Gene

No data available for Paralogs for LOC100421064 Gene

Variants for LOC100421064 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100421064 Gene

Disorders for LOC100421064 Gene

No disorders were found for LOC100421064 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100421064 Gene

Publications for LOC100421064 Gene

No publications were found for LOC100421064 Gene.

No data available for Mastermind for LOC100421064 Gene

Products for LOC100421064 Gene

Sources for LOC100421064 Gene