LOC100421031 Gene (Pseudogene)

Carbonic Anhydrase 5A Pseudogene

GC16P030416
GIFtS:
1
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Aliases for LOC100421031 Gene

Aliases for LOC100421031 Gene

  • Carbonic Anhydrase 5A Pseudogene 3

External Ids for LOC100421031 Gene

Previous GeneCards Identifiers for LOC100421031 Gene

  • GC16U901256
  • GC16P030347
  • GC16P030350

Summaries for LOC100421031 Gene

GeneCards Summary for LOC100421031 Gene

LOC100421031 (Carbonic Anhydrase 5A Pseudogene) is a Pseudogene.

Additional gene information for LOC100421031 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100421031 Gene

Genomics for LOC100421031 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for LOC100421031 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH16J030333 Promoter/Enhancer 1.7 Ensembl ENCODE CraniofacialAtlas 600.7 -1.6 -1620 4.2 HNRNPL GATAD2A PRDM10 REST TFE3 NFKBIZ RCOR2 BACH1 LARP7 PRDM1 SMG1P5 ENSG00000273724 LOC100421031 lnc-MYLPF-3 piR-47100-001 ZNF785 YPEL3 RF00017-2048 CD2BP2 NPIPB13
GH16J030337 Enhancer 0.5 ENCODE 600.7 +1.2 1222 0.5 JUND SPI1 FOSL2 RARA FOS ENSG00000273724 LOC100421031 piR-47100-001 piR-50437-250 lnc-MYLPF-3 CD2BP2 piR-57761 NPIPB13
GH16J030340 Enhancer 0.5 Ensembl 0.7 +4.1 4080 1.2 SP1 YY1 ZNF112 HNF4A RXRA SMG1P5 ZNF629 ENSG00000273724 LOC100421031 lnc-MYLPF-3 piR-50437-250 CD2BP2 piR-57761 NPIPB13
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100421031 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC100421031 Gene

Genomic Locations for LOC100421031 Gene
chr16:30,336,321-30,343,343
(GRCh38/hg38)
Size:
7,023 bases
Orientation:
Plus strand
chr16:30,347,721-30,354,680
(GRCh37/hg19)
Size:
6,960 bases
Orientation:
Plus strand

Genomic View for LOC100421031 Gene

Genes around LOC100421031 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100421031 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100421031 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LOC100421031 Gene

Proteins for LOC100421031 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for LOC100421031 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100421031 Gene

Domains & Families for LOC100421031 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100421031 Gene

Function for LOC100421031 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100421031 Gene

Localization for LOC100421031 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100421031 Gene

Pathways & Interactions for LOC100421031 Gene

PathCards logo

SuperPathways for LOC100421031 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100421031 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100421031 Gene

Drugs & Compounds for LOC100421031 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for LOC100421031 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100421031 Gene

No ASD Table

Relevant External Links for LOC100421031 Gene

GeneLoc Exon Structure for
LOC100421031

No data available for mRNA/cDNA for LOC100421031 Gene

Expression for LOC100421031 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100421031 Gene

Orthologs for LOC100421031 Gene

No data available for Orthologs and Evolution for LOC100421031 Gene

Paralogs for LOC100421031 Gene

No data available for Paralogs for LOC100421031 Gene

Variants for LOC100421031 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100421031 Gene

Disorders for LOC100421031 Gene

No disorders were found for LOC100421031 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100421031 Gene

Publications for LOC100421031 Gene

No publications were found for LOC100421031 Gene.

No data available for Mastermind for LOC100421031 Gene

Products for LOC100421031 Gene

Sources for LOC100421031 Gene