Aliases for LOC100420944 Gene

Aliases for LOC100420944 Gene

  • Nuclear Transcription Factor Y Subunit Beta Pseudogene 3
  • Nuclear Transcription Factor Y, Beta Pseudogene 3

External Ids for LOC100420944 Gene

Previous GeneCards Identifiers for LOC100420944 Gene

  • GC08U901424
  • GC08M039855

Summaries for LOC100420944 Gene

GeneCards Summary for LOC100420944 Gene

LOC100420944 (Nuclear Transcription Factor Y Subunit Beta Pseudogene) is a Pseudogene.

Additional gene information for LOC100420944 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100420944 Gene

Genomics for LOC100420944 Gene

GeneHancer (GH) Regulatory Elements for LOC100420944 Gene

Promoters and enhancers for LOC100420944 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J039997 Enhancer 0.3 FANTOM5 500.7 +1.3 1319 0.3 ENSG00000253790 ENSG00000253939 LOC100420944 lnc-ADAM2-5 IDO2
GH08J039998 Enhancer 0.2 FANTOM5 500.7 0.0 0 0.2 ENSG00000253790 LOC100420944 lnc-ADAM2-5 ENSG00000253939 IDO2
GH08J039995 Promoter 0.7 Ensembl 0.7 +2.3 2291 0.4 CTCF CTBP1 RCOR1 RAD21 USF2 KAT8 PKNOX1 SMC3 ENSG00000253939 LOC100420944 IDO2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100420944 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100420944 Gene

Genomic Locations for LOC100420944 Gene
chr8:39,997,869-39,998,492
(GRCh38/hg38)
Size:
624 bases
Orientation:
Minus strand
chr8:39,855,388-39,856,018
(GRCh37/hg19)
Size:
631 bases
Orientation:
Minus strand

Genomic View for LOC100420944 Gene

Genes around LOC100420944 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100420944 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100420944 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100420944 Gene

Proteins for LOC100420944 Gene

Post-translational modifications for LOC100420944 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100420944 Gene

Domains & Families for LOC100420944 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100420944 Gene

Function for LOC100420944 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100420944 Gene

Localization for LOC100420944 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100420944 Gene

Pathways & Interactions for LOC100420944 Gene

PathCards logo

SuperPathways for LOC100420944 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC100420944 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100420944 Gene

Drugs & Compounds for LOC100420944 Gene

No Compound Related Data Available

Transcripts for LOC100420944 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100420944 Gene

No ASD Table

Relevant External Links for LOC100420944 Gene

GeneLoc Exon Structure for
LOC100420944

No data available for mRNA/cDNA for LOC100420944 Gene

Expression for LOC100420944 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC100420944 Gene

genes like me logo Genes that share expression patterns with LOC100420944: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100420944 Gene

Orthologs for LOC100420944 Gene

No data available for Orthologs and Evolution for LOC100420944 Gene

Paralogs for LOC100420944 Gene

No data available for Paralogs for LOC100420944 Gene

Variants for LOC100420944 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100420944 Gene

Disorders for LOC100420944 Gene

No disorders were found for LOC100420944 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100420944 Gene

Publications for LOC100420944 Gene

No publications were found for LOC100420944 Gene.

No data available for Mastermind for LOC100420944 Gene

Products for LOC100420944 Gene

Sources for LOC100420944 Gene