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Aliases for LOC100420797 Gene

Aliases for LOC100420797 Gene

  • Fc Fragment Of IgG Binding Protein Pseudogene 3

External Ids for LOC100420797 Gene

Previous GeneCards Identifiers for LOC100420797 Gene

  • GC19U901435
  • GC19P035570

Summaries for LOC100420797 Gene

GeneCards Summary for LOC100420797 Gene

LOC100420797 (Fc Fragment Of IgG Binding Protein Pseudogene) is a Pseudogene.

Additional gene information for LOC100420797 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100420797 Gene

Genomics for LOC100420797 Gene

GeneHancer (GH) Regulatory Elements for LOC100420797 Gene

Promoters and enhancers for LOC100420797 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J035090 Promoter/Enhancer 1.5 Ensembl ENCODE dbSUPER 0.4 +11.0 11030 1 CTCF ZSCAN21 RAD21 RXRA ZNF600 PRDM10 PHF21A ZNF143 REST ZEB2 ENSG00000179066 FXYD3 TMEM147-AS1 HPN SCN1B FAM187B ALKBH6 LOC100420797 HPN-AS1
GH19J035074 Enhancer 0.6 Ensembl 0.7 -3.9 -3895 3.1 MCM2 PRDM1 ZNF544 ZNF776 ZNF239 ZNF747 BCL11A POLR2A ZNF366 ZNF202 LOC100421064 TMEM147-AS1 HAUS5 KMT2B LSM14A ZNF599 PROSER3 ARHGAP33 FXYD3 ZNF792
GH19J035088 Enhancer 0.7 ENCODE 0.4 +8.9 8857 1.2 GLIS2 ZBTB33 ZNF600 ZIC2 SP1 ZEB1 ZBTB17 FOS ZKSCAN1 POLR2A FXYD3 HPN ENSG00000179066 LOC100420797 HPN-AS1
GH19J035085 Enhancer 0.6 ENCODE 0.4 +6.1 6122 2.4 ZNF687 GLIS2 ZBTB33 PRDM10 SCRT2 RUNX3 HDGF ZNF623 ATF2 HPN-AS1 FXYD3 HPN SCN1B FAM187B FFAR2 DMKN KRTDAP ENSG00000179066 LOC100420797
GH19J035084 Enhancer 0.3 ENCODE 0.7 +4.5 4530 0.7 GLI4 HPN-AS1 FXYD3 HPN FAM187B DMKN LOC100420797 ENSG00000179066
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100420797 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100420797 Gene

Genomic Locations for LOC100420797 Gene
chr19:35,079,868-35,088,832
(GRCh38/hg38)
Size:
8,965 bases
Orientation:
Plus strand
chr19:35,570,772-35,579,736
(GRCh37/hg19)
Size:
8,965 bases
Orientation:
Plus strand

Genomic View for LOC100420797 Gene

Genes around LOC100420797 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100420797 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100420797 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100420797 Gene

Proteins for LOC100420797 Gene

Post-translational modifications for LOC100420797 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100420797 Gene

Domains & Families for LOC100420797 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100420797 Gene

Function for LOC100420797 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100420797 Gene

Localization for LOC100420797 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100420797 Gene

Pathways & Interactions for LOC100420797 Gene

PathCards logo

SuperPathways for LOC100420797 Gene

No Data Available

Interacting Proteins for LOC100420797 Gene

Gene Ontology (GO) - Biological Process for LOC100420797 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100420797 Gene

Drugs & Compounds for LOC100420797 Gene

No Compound Related Data Available

Transcripts for LOC100420797 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100420797 Gene

No ASD Table

Relevant External Links for LOC100420797 Gene

GeneLoc Exon Structure for
LOC100420797

No data available for mRNA/cDNA for LOC100420797 Gene

Expression for LOC100420797 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100420797 Gene

Orthologs for LOC100420797 Gene

No data available for Orthologs and Evolution for LOC100420797 Gene

Paralogs for LOC100420797 Gene

No data available for Paralogs for LOC100420797 Gene

Variants for LOC100420797 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100420797 Gene

Disorders for LOC100420797 Gene

No disorders were found for LOC100420797 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100420797 Gene

Publications for LOC100420797 Gene

No publications were found for LOC100420797 Gene.

No data available for External Links for LOC100420797 Gene

Products for LOC100420797 Gene

Sources for LOC100420797 Gene

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