Aliases for LOC100420647 Gene

Aliases for LOC100420647 Gene

  • Voltage Dependent Anion Channel 3 Pseudogene 3

External Ids for LOC100420647 Gene

Previous GeneCards Identifiers for LOC100420647 Gene

  • GC07U903016
  • GC07P080821

Summaries for LOC100420647 Gene

GeneCards Summary for LOC100420647 Gene

LOC100420647 (Voltage Dependent Anion Channel 3 Pseudogene) is a Pseudogene.

Additional gene information for LOC100420647 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100420647 Gene

Genomics for LOC100420647 Gene

GeneHancer (GH) Regulatory Elements for LOC100420647 Gene

Promoters and enhancers for LOC100420647 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J081190 Enhancer 0.8 Ensembl ENCODE 500.7 0.0 -28 1.5 JUND FOS REST FOSL2 CEBPB JUN FOSL1 PKNOX1 EP300 MEIS2 ENSG00000226671 LOC100420647 lnc-CD36-4 ENSG00000237896 piR-31951-028
GH07J081187 Enhancer 0.3 Ensembl ENCODE 0.7 -3.5 -3468 0.2 LOC100420647 piR-31951-028 ENSG00000237896
GH07J081186 Enhancer 0.2 ENCODE 0.7 -4.6 -4634 0.8 ENSG00000237896 LOC100420647 piR-31951-028
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100420647 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100420647 Gene

Genomic Locations for LOC100420647 Gene
chr7:81,191,361-81,192,009
(GRCh38/hg38)
Size:
649 bases
Orientation:
Plus strand
chr7:80,820,677-80,821,325
(GRCh37/hg19)
Size:
649 bases
Orientation:
Plus strand

Genomic View for LOC100420647 Gene

Genes around LOC100420647 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100420647 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100420647 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100420647 Gene

Proteins for LOC100420647 Gene

Post-translational modifications for LOC100420647 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100420647 Gene

Domains & Families for LOC100420647 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100420647 Gene

Function for LOC100420647 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100420647 Gene

Localization for LOC100420647 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100420647 Gene

Pathways & Interactions for LOC100420647 Gene

PathCards logo

SuperPathways for LOC100420647 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC100420647 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100420647 Gene

Drugs & Compounds for LOC100420647 Gene

No Compound Related Data Available

Transcripts for LOC100420647 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100420647 Gene

No ASD Table

Relevant External Links for LOC100420647 Gene

GeneLoc Exon Structure for
LOC100420647

No data available for mRNA/cDNA for LOC100420647 Gene

Expression for LOC100420647 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC100420647 Gene

genes like me logo Genes that share expression patterns with LOC100420647: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100420647 Gene

Orthologs for LOC100420647 Gene

No data available for Orthologs and Evolution for LOC100420647 Gene

Paralogs for LOC100420647 Gene

No data available for Paralogs for LOC100420647 Gene

Variants for LOC100420647 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100420647 Gene

Disorders for LOC100420647 Gene

No disorders were found for LOC100420647 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100420647 Gene

Publications for LOC100420647 Gene

No publications were found for LOC100420647 Gene.

No data available for Mastermind for LOC100420647 Gene

Products for LOC100420647 Gene

Sources for LOC100420647 Gene