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Aliases for LOC100420586 Gene

Aliases for LOC100420586 Gene

  • Rho GTPase Activating Protein 33 Pseudogene 3

External Ids for LOC100420586 Gene

Previous GeneCards Identifiers for LOC100420586 Gene

  • GC19U901434

Summaries for LOC100420586 Gene

GeneCards Summary for LOC100420586 Gene

LOC100420586 (Rho GTPase Activating Protein 33 Pseudogene) is a Pseudogene.

Additional gene information for LOC100420586 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100420586 Gene

Genomics for LOC100420586 Gene

GeneHancer (GH) Regulatory Elements for LOC100420586 Gene

Promoters and enhancers for LOC100420586 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J000589 Promoter/Enhancer 1.7 EPDnew Ensembl dbSUPER 550.7 +1.6 1614 0.8 ZNF148 SP2 GATAD2B SCRT2 EZH2 ZFX ZBTB26 REST KLF10 VEZF1 ENSG00000267036 GC19M000593 GC19P000591 GC19P000592 HCN2 LOC100420586 CDC34
GH19J000605 Enhancer 0.5 FANTOM5 0.4 -13.1 -13082 0.1 HDGF KLF8 KLF1 SP1 GC19P000606 THEG HCN2 LOC100420586
GH19J000604 Enhancer 0.5 ENCODE 0.4 -12.9 -12941 0.1 HDGF KLF8 KLF1 SP1 GC19P000606 HCN2 LOC100420586
GH19J000602 Enhancer 0.4 dbSUPER 0.4 -11.2 -11232 1.6 ZNF707 ZBTB33 MIER2 TMEM259 GRIN3B RNF126 MED16 C19orf24 HCN2 GC19P000606 LOC100420586
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100420586 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100420586 Gene

Genomic Locations for LOC100420586 Gene
chr19:590,303-591,615
(GRCh38/hg38)
Size:
1,313 bases
Orientation:
Minus strand
chr19:590,277-591,615
(GRCh37/hg19)
Size:
1,339 bases
Orientation:
Minus strand

Genomic View for LOC100420586 Gene

Genes around LOC100420586 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100420586 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100420586 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100420586 Gene

Proteins for LOC100420586 Gene

Post-translational modifications for LOC100420586 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100420586 Gene

Domains & Families for LOC100420586 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100420586 Gene

Function for LOC100420586 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100420586 Gene

Localization for LOC100420586 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100420586 Gene

Pathways & Interactions for LOC100420586 Gene

SuperPathways for LOC100420586 Gene

No Data Available

Interacting Proteins for LOC100420586 Gene

Gene Ontology (GO) - Biological Process for LOC100420586 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100420586 Gene

Drugs & Compounds for LOC100420586 Gene

No Compound Related Data Available

Transcripts for LOC100420586 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100420586 Gene

No ASD Table

Relevant External Links for LOC100420586 Gene

GeneLoc Exon Structure for
LOC100420586

No data available for mRNA/cDNA for LOC100420586 Gene

Expression for LOC100420586 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100420586 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100420586 Gene

This gene is overexpressed in Brain - Spinal cord (cervical c-1) (x5.7), Brain - Putamen (basal ganglia) (x5.7), Brain - Cortex (x4.9), Brain - Caudate (basal ganglia) (x4.8), Brain - Substantia nigra (x4.8), and Brain - Nucleus accumbens (basal ganglia) (x4.7).
genes like me logo Genes that share expression patterns with LOC100420586: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100420586 Gene

Orthologs for LOC100420586 Gene

No data available for Orthologs and Evolution for LOC100420586 Gene

Paralogs for LOC100420586 Gene

No data available for Paralogs for LOC100420586 Gene

Variants for LOC100420586 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100420586 Gene

Disorders for LOC100420586 Gene

No disorders were found for LOC100420586 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100420586 Gene

Publications for LOC100420586 Gene

No publications were found for LOC100420586 Gene.

Products for LOC100420586 Gene

Sources for LOC100420586 Gene

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