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Aliases for LOC100420353 Gene

Aliases for LOC100420353 Gene

  • Tripartite Motif Containing 60 Pseudogene 3

External Ids for LOC100420353 Gene

Previous GeneCards Identifiers for LOC100420353 Gene

  • GC02U902114
  • GC02M223510

Summaries for LOC100420353 Gene

GeneCards Summary for LOC100420353 Gene

LOC100420353 (Tripartite Motif Containing 60 Pseudogene) is a Pseudogene.

Additional gene information for LOC100420353 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100420353 Gene

Genomics for LOC100420353 Gene

GeneHancer (GH) Regulatory Elements for LOC100420353 Gene

Promoters and enhancers for LOC100420353 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J222654 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 0.4 -8.5 -8488 3.4 HDGF PKNOX1 FOXA2 MLX ARNT ZFP64 ARID4B SIN3A DMAP1 YY1 FARSB ENSG00000261428 LOC100420353 GC02P222642
GH02J222651 Enhancer 0.7 Ensembl ENCODE 0.4 -5.6 -5568 2.1 HDGF JUNB MNT RUNX3 ENSG00000261428 SGPP2 FARSB LOC100420353 GC02P222642
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100420353 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100420353 Gene

Genomic Locations for LOC100420353 Gene
chr2:222,645,916-222,647,320
(GRCh38/hg38)
Size:
1,405 bases
Orientation:
Minus strand
chr2:223,510,635-223,512,039
(GRCh37/hg19)
Size:
1,405 bases
Orientation:
Minus strand

Genomic View for LOC100420353 Gene

Genes around LOC100420353 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100420353 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100420353 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100420353 Gene

Proteins for LOC100420353 Gene

Post-translational modifications for LOC100420353 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100420353 Gene

Domains & Families for LOC100420353 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100420353 Gene

Function for LOC100420353 Gene

Phenotypes From GWAS Catalog for LOC100420353 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100420353 Gene

Localization for LOC100420353 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100420353 Gene

Pathways & Interactions for LOC100420353 Gene

SuperPathways for LOC100420353 Gene

No Data Available

Interacting Proteins for LOC100420353 Gene

Gene Ontology (GO) - Biological Process for LOC100420353 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100420353 Gene

Drugs & Compounds for LOC100420353 Gene

No Compound Related Data Available

Transcripts for LOC100420353 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100420353 Gene

No ASD Table

Relevant External Links for LOC100420353 Gene

GeneLoc Exon Structure for
LOC100420353

No data available for mRNA/cDNA for LOC100420353 Gene

Expression for LOC100420353 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100420353 Gene

Orthologs for LOC100420353 Gene

No data available for Orthologs and Evolution for LOC100420353 Gene

Paralogs for LOC100420353 Gene

No data available for Paralogs for LOC100420353 Gene

Variants for LOC100420353 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100420353 Gene

Disorders for LOC100420353 Gene

No disorders were found for LOC100420353 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100420353 Gene

Publications for LOC100420353 Gene

No publications were found for LOC100420353 Gene.

Products for LOC100420353 Gene

Sources for LOC100420353 Gene

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