Aliases for LOC100420339 Gene

Aliases for LOC100420339 Gene

  • Opioid Growth Factor Receptor Pseudogene 3

External Ids for LOC100420339 Gene

Previous GeneCards Identifiers for LOC100420339 Gene

  • GC01U903054
  • GC01P002986

Summaries for LOC100420339 Gene

GeneCards Summary for LOC100420339 Gene

LOC100420339 (Opioid Growth Factor Receptor Pseudogene) is a Pseudogene.

Additional gene information for LOC100420339 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100420339 Gene

Genomics for LOC100420339 Gene

GeneHancer (GH) Regulatory Elements for LOC100420339 Gene

Promoters and enhancers for LOC100420339 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J003065 Promoter/Enhancer 2.2 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 750.6 +0.8 845 9.4 CTCF ZBTB6 RBPJ NR2F1 NR2F6 ZNF362 RAD21 PRDM1 GLIS2 ZIC2 PRDM16 LOC100420339 PRDM16-DT ACTRT2 ENSG00000269896 MIR4251
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100420339 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100420339 Gene

Genomic Locations for LOC100420339 Gene
chr1:3,069,658-3,070,697
(GRCh38/hg38)
Size:
1,040 bases
Orientation:
Plus strand
chr1:2,986,222-2,987,261
(GRCh37/hg19)
Size:
1,040 bases
Orientation:
Plus strand

Genomic View for LOC100420339 Gene

Genes around LOC100420339 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100420339 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100420339 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100420339 Gene

Proteins for LOC100420339 Gene

Post-translational modifications for LOC100420339 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100420339 Gene

Domains & Families for LOC100420339 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100420339 Gene

Function for LOC100420339 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100420339 Gene

Localization for LOC100420339 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100420339 Gene

Pathways & Interactions for LOC100420339 Gene

PathCards logo

SuperPathways for LOC100420339 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100420339 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100420339 Gene

Drugs & Compounds for LOC100420339 Gene

No Compound Related Data Available

Transcripts for LOC100420339 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100420339 Gene

No ASD Table

Relevant External Links for LOC100420339 Gene

GeneLoc Exon Structure for
LOC100420339

No data available for mRNA/cDNA for LOC100420339 Gene

Expression for LOC100420339 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100420339 Gene

Orthologs for LOC100420339 Gene

No data available for Orthologs and Evolution for LOC100420339 Gene

Paralogs for LOC100420339 Gene

No data available for Paralogs for LOC100420339 Gene

Variants for LOC100420339 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100420339 Gene

Disorders for LOC100420339 Gene

No disorders were found for LOC100420339 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100420339 Gene

Publications for LOC100420339 Gene

No publications were found for LOC100420339 Gene.

No data available for External Links for LOC100420339 Gene

Products for LOC100420339 Gene

Sources for LOC100420339 Gene