Aliases for LOC100420262 Gene

Aliases for LOC100420262 Gene

  • Mitochondrial Fission Factor Pseudogene 3

External Ids for LOC100420262 Gene

Previous GeneCards Identifiers for LOC100420262 Gene

  • GC01U903060
  • GC01P179275

Summaries for LOC100420262 Gene

GeneCards Summary for LOC100420262 Gene

LOC100420262 (Mitochondrial Fission Factor Pseudogene) is a Pseudogene.

Additional gene information for LOC100420262 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100420262 Gene

Genomics for LOC100420262 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC100420262 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J179305 Enhancer 0.6 ENCODE 600.7 -1.2 -1218 0.2 ZNF24 NFE2 ZNF316 MAFK MAFG TFDP1 ZNF592 DPF2 NFE2L2 ZNF146 LOC100420262 TOR3A AXDND1 SOAT1
GH01J179306 Enhancer 0.4 ENCODE 600.7 -0.8 -838 0.2 TFDP1 BACH1 ARID1B SMARCA4 LOC100420262 SOAT1 AXDND1
GH01J179293 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 0.4 -12.3 -12295 3.7 CEBPG SP1 HNRNPL CREB1 GATAD2A PRDM10 ZNF629 TFE3 ZNF512 RFX1 SOAT1 TOR3A AXDND1 LHX4 TDRD5 LOC100420262
GH01J179309 Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.7 +4.2 4162 4.8 IKZF1 DPF2 TCF12 CEBPB NFE2 ZNF316 FOS TRIM24 NCOR1 FOSL1 AXDND1 ABL2 TOR3A SOAT1 TDRD5 LOC100420262 lnc-AXDND1-1
GH01J179302 Enhancer 0.7 ENCODE 0.7 -3.2 -3243 1.5 SCRT2 TCF7L2 BRCA1 CEBPB OSR2 ZNF580 RCOR1 ATF2 EP300 WT1 TOR3A AXDND1 TDRD5 LOC100420262 SOAT1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100420262 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC100420262 Gene

Genomic Locations for LOC100420262 Gene
chr1:179,306,839-179,307,418
(GRCh38/hg38)
Size:
580 bases
Orientation:
Plus strand
chr1:179,275,974-179,276,553
(GRCh37/hg19)
Size:
580 bases
Orientation:
Plus strand

Genomic View for LOC100420262 Gene

Genes around LOC100420262 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100420262 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100420262 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100420262 Gene

Proteins for LOC100420262 Gene

Post-translational modifications for LOC100420262 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100420262 Gene

Domains & Families for LOC100420262 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100420262 Gene

Function for LOC100420262 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100420262 Gene

Localization for LOC100420262 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100420262 Gene

Pathways & Interactions for LOC100420262 Gene

PathCards logo

SuperPathways for LOC100420262 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100420262 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100420262 Gene

Drugs & Compounds for LOC100420262 Gene

No Compound Related Data Available

Transcripts for LOC100420262 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100420262 Gene

No ASD Table

Relevant External Links for LOC100420262 Gene

GeneLoc Exon Structure for
LOC100420262

No data available for mRNA/cDNA for LOC100420262 Gene

Expression for LOC100420262 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100420262 Gene

Orthologs for LOC100420262 Gene

No data available for Orthologs and Evolution for LOC100420262 Gene

Paralogs for LOC100420262 Gene

No data available for Paralogs for LOC100420262 Gene

Variants for LOC100420262 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100420262 Gene

Disorders for LOC100420262 Gene

No disorders were found for LOC100420262 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100420262 Gene

Publications for LOC100420262 Gene

No publications were found for LOC100420262 Gene.

No data available for Mastermind for LOC100420262 Gene

Products for LOC100420262 Gene

Sources for LOC100420262 Gene