Aliases for LOC100420096 Gene

Aliases for LOC100420096 Gene

  • IGF Like Family Receptor 1 Pseudogene 3
  • Transmembrane Protein 149 (TMEM149) Pseudogene 5
  • AL355076.3 5

External Ids for LOC100420096 Gene

Previous GeneCards Identifiers for LOC100420096 Gene

  • GC14U901197
  • GC14M065701

Summaries for LOC100420096 Gene

GeneCards Summary for LOC100420096 Gene

LOC100420096 (IGF Like Family Receptor 1 Pseudogene) is a Pseudogene.

Additional gene information for LOC100420096 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100420096 Gene

Genomics for LOC100420096 Gene

GeneHancer (GH) Regulatory Elements for LOC100420096 Gene

Promoters and enhancers for LOC100420096 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J065224 Promoter/Enhancer 1.9 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +6.5 6482 8.4 EP300 FOXK2 ZNF217 TCF12 POLR2G SP1 NCOR1 KDM6A TCF7 FOXA1 FUT8 LINC02324 LOC100420096
GH14J065235 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 0.7 -2.9 -2868 5 CTCF POLR2G TCF7 FOXA1 CTBP1 SKI TEAD1 ZBTB26 ZKSCAN8 FOXA2 FUT8 LOC100420096 RF00017-1581 ENSG00000258760
GH14J065222 Enhancer 0.9 ENCODE dbSUPER 0.4 +12.5 12536 0.9 CTCF TEAD4 REST RAD21 TRIM22 TEAD1 SMC3 CREB3L1 ZNF263 YY1 LINC02324 LOC100420096
GH14J065240 Enhancer 0.3 Ensembl dbSUPER 0.4 -5.7 -5700 0.4 RF00017-1581 FUT8 LOC100420096 ENSG00000258760
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100420096 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100420096 Gene

Genomic Locations for LOC100420096 Gene
chr14:65,234,515-65,235,101
(GRCh38/hg38)
Size:
587 bases
Orientation:
Minus strand
chr14:65,701,233-65,701,819
(GRCh37/hg19)
Size:
587 bases
Orientation:
Minus strand

Genomic View for LOC100420096 Gene

Genes around LOC100420096 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100420096 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100420096 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100420096 Gene

Proteins for LOC100420096 Gene

Post-translational modifications for LOC100420096 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100420096 Gene

Domains & Families for LOC100420096 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100420096 Gene

Function for LOC100420096 Gene

Phenotypes From GWAS Catalog for LOC100420096 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100420096 Gene

Localization for LOC100420096 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100420096 Gene

Pathways & Interactions for LOC100420096 Gene

PathCards logo

SuperPathways for LOC100420096 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC100420096 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100420096 Gene

Drugs & Compounds for LOC100420096 Gene

No Compound Related Data Available

Transcripts for LOC100420096 Gene

mRNA/cDNA for LOC100420096 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100420096 Gene

No ASD Table

Relevant External Links for LOC100420096 Gene

GeneLoc Exon Structure for
LOC100420096

Expression for LOC100420096 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC100420096 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100420096 Gene

This gene is overexpressed in Small Intestine - Terminal Ileum (x12.8), Pancreas (x9.8), and Spleen (x6.8).
genes like me logo Genes that share expression patterns with LOC100420096: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100420096 Gene

Orthologs for LOC100420096 Gene

Evolution for LOC100420096 Gene

ENSEMBL:
Gene Tree for LOC100420096 (if available)
TreeFam:
Gene Tree for LOC100420096 (if available)

No data available for Orthologs for LOC100420096 Gene

Paralogs for LOC100420096 Gene

No data available for Paralogs for LOC100420096 Gene

Variants for LOC100420096 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100420096 Gene

Disorders for LOC100420096 Gene

No disorders were found for LOC100420096 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100420096 Gene

Publications for LOC100420096 Gene

No publications were found for LOC100420096 Gene.

No data available for Mastermind for LOC100420096 Gene

Products for LOC100420096 Gene

Sources for LOC100420096 Gene