Aliases for LOC100419831 Gene

Aliases for LOC100419831 Gene

  • Zinc Finger Protein 420 Pseudogene 3
  • Zinc Finger Protein 420 (ZNF420) Pseudogene 5
  • AC008752.3 5

External Ids for LOC100419831 Gene

Previous GeneCards Identifiers for LOC100419831 Gene

  • GC19U901409
  • GC19M009866

Summaries for LOC100419831 Gene

GeneCards Summary for LOC100419831 Gene

LOC100419831 (Zinc Finger Protein 420 Pseudogene) is a Pseudogene.

Additional gene information for LOC100419831 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100419831 Gene

Genomics for LOC100419831 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC100419831 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J010100 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 87.6 -347.5 -347524 8.3 CHD2 SP1 BCL11A MXD4 CEBPA SIX5 NR2C1 MNT SMAD5 ETS1 PPAN ANGPTL6 PPAN-P2RY11 ILF3 ZNF699 LOC100419831 ZNF317 KRI1 FBXL12 ZNF559
GH19J010651 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 71.4 -897.5 -897465 5.3 TBP ZBTB10 BCL11A MXD4 SP1 FEZF1 CEBPA SIX5 NR2C1 MNT ILF3 ILF3-DT piR-46435 piR-61384 ZNF627 LOC100419831 KRI1 DNMT1 FBXL12 RAVER1
GH19J010415 Promoter/Enhancer 2 EPDnew FANTOM5 Ensembl ENCODE 86.3 -661.8 -661766 5.9 ZSCAN16 CHD2 TBP ZBTB10 SP1 MXD4 NR2C1 MNT IKZF1 BRCA1 CDC37 PDE4A ILF3 ZNF266 KRI1 DNMT1 LOC100419831 RAVER1 PPAN FBXL12
GH19J010700 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 64.9 -944.6 -944638 2.2 TBP ZBTB10 SP1 MXD4 SIX5 NR2C1 MNT IKZF1 SMAD5 ETS1 QTRT1 ILF3 ZNF627 LOC100419831 KRI1 FBXL12 DNMT1 RAVER1 PRKCSH YIPF2
GH19J010379 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 53.5 -623.6 -623638 2.2 TBP ZBTB10 SP1 NR2C1 MNT IKZF1 SMAD5 IRF2 MBD2 ZNF217 TYK2 lnc-CDC37-1 lnc-PDE4A-3 ILF3 KRI1 FBXL12 PPAN RAVER1 ZNF561 LOC100419831
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100419831 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC100419831 Gene

Latest Assembly
chr19:9,756,152-9,756,863
(GRCh38/hg38)
Size:
712 bases
Orientation:
Minus strand

Previous Assembly
chr19:9,866,828-9,867,539
(GRCh37/hg19 by Entrez Gene)
Size:
712 bases
Orientation:
Minus strand

chr19:9,866,828-9,867,539
(GRCh37/hg19 by Ensembl)
Size:
712 bases
Orientation:
Minus strand

Genomic View for LOC100419831 Gene

Genes around LOC100419831 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100419831 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100419831 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100419831 Gene

Proteins for LOC100419831 Gene

Post-translational modifications for LOC100419831 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100419831 Gene

Domains & Families for LOC100419831 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100419831 Gene

Function for LOC100419831 Gene

Phenotypes From GWAS Catalog for LOC100419831 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100419831 Gene

Localization for LOC100419831 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100419831 Gene

Pathways & Interactions for LOC100419831 Gene

PathCards logo

SuperPathways for LOC100419831 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100419831 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100419831 Gene

Drugs & Compounds for LOC100419831 Gene

No Compound Related Data Available

Transcripts for LOC100419831 Gene

mRNA/cDNA for LOC100419831 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100419831 Gene

No ASD Table

Relevant External Links for LOC100419831 Gene

GeneLoc Exon Structure for
LOC100419831

Expression for LOC100419831 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC100419831 Gene

genes like me logo Genes that share expression patterns with LOC100419831: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100419831 Gene

Orthologs for LOC100419831 Gene

Evolution for LOC100419831 Gene

ENSEMBL:
Gene Tree for LOC100419831 (if available)
TreeFam:
Gene Tree for LOC100419831 (if available)

No data available for Orthologs for LOC100419831 Gene

Paralogs for LOC100419831 Gene

No data available for Paralogs for LOC100419831 Gene

Variants for LOC100419831 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100419831 Gene

Disorders for LOC100419831 Gene

No disorders were found for LOC100419831 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100419831 Gene

Publications for LOC100419831 Gene

No publications were found for LOC100419831 Gene.

No data available for Mastermind for LOC100419831 Gene

Products for LOC100419831 Gene

Sources for LOC100419831 Gene