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Aliases for LOC100419739 Gene

Subcategory (RNA class) for LOC100419739 Gene

antisense

Aliases for LOC100419739 Gene

  • Zinc Finger Protein 341 Pseudogene 3

External Ids for LOC100419739 Gene

ORGUL Members for LOC100419739 Gene

Previous GeneCards Identifiers for LOC100419739 Gene

  • GC04U901333
  • GC04M081307

Summaries for LOC100419739 Gene

GeneCards Summary for LOC100419739 Gene

LOC100419739 (Zinc Finger Protein 341 Pseudogene) is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for LOC100419739 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100419739 Gene

Genomics for LOC100419739 Gene

GeneHancer (GH) Regulatory Elements for LOC100419739 Gene

Promoters and enhancers for LOC100419739 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J080424 Enhancer 0.8 Ensembl ENCODE 0.3 -34.5 -34475 1.6 ZFX BACH1 ZNF740 DPF2 RUNX3 E2F5 GABPA NR2C2 FOSL1 MEF2D CFAP299 LOC100419739 GC04M080460
GH04J080393 Enhancer 0.4 Ensembl 0.7 -5.0 -4975 0.2 JUND MNT BMP3 CFAP299 LOC100419739 GC04M080460
GH04J080434 Enhancer 0.6 Ensembl 0.3 -45.8 -45757 0.6 MAFK RFX1 ZNF316 SCRT2 FOS MAFG FOSL1 MYNN ZNF143 EMSY GC04M080460 LOC100419739 CFAP299
GH04J080439 Enhancer 0.6 ENCODE 0.2 -51.2 -51192 1 SP1 ZNF148 TRIM24 LEF1 MGA E2F5 RNF2 L3MBTL2 CFAP299 GC04M080460 LOC100419739
GH04J080453 Enhancer 0.6 Ensembl ENCODE 0.2 -65.8 -65775 1.8 JUND FOS GC04M080460 LOC100419739 CFAP299
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100419739 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100419739 Gene

Genomic Locations for LOC100419739 Gene
chr4:80,385,584-80,388,725
(GRCh38/hg38)
Size:
3,142 bases
Orientation:
Minus strand
chr4:81,307,135-81,309,879
(GRCh37/hg19)
Size:
2,745 bases
Orientation:
Minus strand

Genomic View for LOC100419739 Gene

Genes around LOC100419739 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100419739 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100419739 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100419739 Gene

Proteins for LOC100419739 Gene

Post-translational modifications for LOC100419739 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100419739 Gene

Domains & Families for LOC100419739 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100419739 Gene

Function for LOC100419739 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100419739 Gene

Localization for LOC100419739 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100419739 Gene

Pathways & Interactions for LOC100419739 Gene

PathCards logo

SuperPathways for LOC100419739 Gene

No Data Available

Interacting Proteins for LOC100419739 Gene

Gene Ontology (GO) - Biological Process for LOC100419739 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100419739 Gene

Drugs & Compounds for LOC100419739 Gene

No Compound Related Data Available

Transcripts for LOC100419739 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100419739 Gene

No ASD Table

Relevant External Links for LOC100419739 Gene

GeneLoc Exon Structure for
LOC100419739

No data available for mRNA/cDNA for LOC100419739 Gene

Expression for LOC100419739 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100419739 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100419739 Gene

This gene is overexpressed in Testis (x36.2).
genes like me logo Genes that share expression patterns with LOC100419739: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100419739 Gene

Orthologs for LOC100419739 Gene

No data available for Orthologs and Evolution for LOC100419739 Gene

Paralogs for LOC100419739 Gene

No data available for Paralogs for LOC100419739 Gene

Variants for LOC100419739 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100419739 Gene

Disorders for LOC100419739 Gene

No disorders were found for LOC100419739 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100419739 Gene

Publications for LOC100419739 Gene

No publications were found for LOC100419739 Gene.

No data available for External Links for LOC100419739 Gene

Products for LOC100419739 Gene

Sources for LOC100419739 Gene

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