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Aliases for LOC100419643 Gene

Subcategory (RNA class) for LOC100419643 Gene

antisense

Aliases for LOC100419643 Gene

  • Ring Finger Protein 14 Pseudogene 3
  • AC004893.1 5

External Ids for LOC100419643 Gene

ORGUL Members for LOC100419643 Gene

Previous GeneCards Identifiers for LOC100419643 Gene

  • GC07U902960
  • GC07M098597

Summaries for LOC100419643 Gene

GeneCards Summary for LOC100419643 Gene

LOC100419643 (Ring Finger Protein 14 Pseudogene) is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for LOC100419643 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100419643 Gene

Genomics for LOC100419643 Gene

GeneHancer (GH) Regulatory Elements for LOC100419643 Gene

Promoters and enhancers for LOC100419643 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I099557 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 33 -561.1 -561056 7.9 ZFP64 DMAP1 YY1 E2F8 ZNF143 SP3 MEF2D SSRP1 GLIS1 NBN ZNF655 FAM200A ZSCAN25 ZNF3 TRIM4 PTCD1 LOC101927550 ZNF394 LOC100419643 TRRAP
GH07I099579 Enhancer 1.3 FANTOM5 Ensembl ENCODE 63.4 -580.5 -580471 1.2 ZNF529 ZNF2 ZBTB40 RAD21 ZNF335 ZNF213 ZNF354C ZNF366 ZNF202 ZNF680 ZSCAN25 TRRAP TRIM4 LOC100131859 ZNF3 ZNF655 ENSG00000242798 STAG3L5P AP4M1 LOC101927550
GH07I098470 Enhancer 1.3 FANTOM5 Ensembl ENCODE 62.1 +529.2 529218 1.2 ATF1 ZFP64 ZNF213 ZNF202 ZNF680 ZBTB11 ZC3H11A REST ZNF623 ZNF518A TRRAP LOC101927550 LOC100419643 LOC100131859 PTCD1 RPS3AP26 SMURF1 NPTX2 BAIAP2L1 ENSG00000272950
GH07I099140 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 31.1 -142.9 -142933 4.7 HDGF PKNOX1 ARNT ARID4B SIN3A YBX1 DMAP1 POLR2B ZNF766 ZNF213 SMURF1 ZSCAN25 TRIM4 ZNF655 ZNF3 LOC101927550 TRRAP PTCD1 LOC100419643 ENSG00000242798
GH07I099471 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 32.4 -472.7 -472674 3 HDGF PKNOX1 CLOCK FOXA2 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF789 ZSCAN25 PPP1R35 PTCD1 MEPCE TRRAP STAG3L5P TRIM4 LOC101927550 AP4M1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100419643 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100419643 Gene

Genomic Locations for LOC100419643 Gene
chr7:98,998,536-98,999,930
(GRCh38/hg38)
Size:
1,395 bases
Orientation:
Minus strand
chr7:98,596,159-98,597,553
(GRCh37/hg19)

Genomic View for LOC100419643 Gene

Genes around LOC100419643 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100419643 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100419643 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100419643 Gene

Proteins for LOC100419643 Gene

Post-translational modifications for LOC100419643 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100419643 Gene

Domains & Families for LOC100419643 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100419643 Gene

Function for LOC100419643 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100419643 Gene

Localization for LOC100419643 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100419643 Gene

Pathways & Interactions for LOC100419643 Gene

SuperPathways for LOC100419643 Gene

No Data Available

Interacting Proteins for LOC100419643 Gene

Gene Ontology (GO) - Biological Process for LOC100419643 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100419643 Gene

Drugs & Compounds for LOC100419643 Gene

No Compound Related Data Available

Transcripts for LOC100419643 Gene

mRNA/cDNA for LOC100419643 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100419643 Gene

No ASD Table

Relevant External Links for LOC100419643 Gene

GeneLoc Exon Structure for
LOC100419643

Expression for LOC100419643 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100419643 Gene

genes like me logo Genes that share expression patterns with LOC100419643: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100419643 Gene

Orthologs for LOC100419643 Gene

Evolution for LOC100419643 Gene

ENSEMBL:
Gene Tree for LOC100419643 (if available)
TreeFam:
Gene Tree for LOC100419643 (if available)

No data available for Orthologs for LOC100419643 Gene

Paralogs for LOC100419643 Gene

No data available for Paralogs for LOC100419643 Gene

Variants for LOC100419643 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100419643 Gene

Disorders for LOC100419643 Gene

No disorders were found for LOC100419643 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100419643 Gene

Publications for LOC100419643 Gene

No publications were found for LOC100419643 Gene.

Products for LOC100419643 Gene

Sources for LOC100419643 Gene

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