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LOC100419574 Gene(Pseudogene)

HECT And RLD Domain Containing E3 Ubiquitin Protein Ligase 2 Pseudogene

GCID:
GC15M028679
GIFtS:
5

Aliases for LOC100419574 Gene

Aliases for LOC100419574 Gene

  • HECT And RLD Domain Containing E3 Ubiquitin Protein Ligase 2 Pseudogene 3
  • AC055876.2 5

External Ids for LOC100419574 Gene

Previous GeneCards Identifiers for LOC100419574 Gene

  • GC15U901293
  • GC15M028924

Summaries for LOC100419574 Gene

GeneCards Summary for LOC100419574 Gene

LOC100419574 (HECT And RLD Domain Containing E3 Ubiquitin Protein Ligase 2 Pseudogene) is a Pseudogene.

Additional gene information for LOC100419574 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100419574 Gene

Genomics for LOC100419574 Gene

GeneHancer (GH) Regulatory Elements for LOC100419574 Gene

Promoters and enhancers for LOC100419574 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15I028896 Enhancer 0.8 ENCODE 18.9 -214.9 -214879 1.2 FOXA2 ZSCAN4 INSM2 ZEB1 ZNF155 ZNF366 ZNF391 FOS KLF13 SP3 HERC2 LOC100419574 RPL41P2 HERC2P9 ENSG00000259644 APBA2 ENSG00000259277
GH15I028737 Promoter/Enhancer 1.2 Ensembl ENCODE 4.5 -55.9 -55948 2.4 CTCF KLF1 RB1 BACH1 SIN3A ZBTB40 ZNF335 CTBP1 ZNF316 MTA3 GOLGA8M PIR44347 WHAMMP2 HERC2P9 LOC100419574
GH15I028788 Promoter 0.5 Ensembl 9.5 -106.8 -106849 0.6 ENSG00000256951 PDCD6IPP2 LOC100289656 PIR48281 PIR59663 LOC100419574 HERC2P9
GH15I028784 Enhancer 0.3 Ensembl 8.7 -102.7 -102749 0.4 NFIC LOC100419574 LOC100289656 ENSG00000260844
GH15I028135 Enhancer 0.3 ENCODE 5.9 +545.3 545340 2 SPI1 HERC2 OCA2 LOC100419574 GC15M028288
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100419574 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100419574 Gene

Genomic Locations for LOC100419574 Gene
chr15:28,679,404-28,682,252
(GRCh38/hg38)
Size:
2,849 bases
Orientation:
Minus strand
chr15:28,924,550-28,927,398
(GRCh37/hg19)

Genomic View for LOC100419574 Gene

Genes around LOC100419574 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100419574 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100419574 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100419574 Gene

Proteins for LOC100419574 Gene

Post-translational modifications for LOC100419574 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100419574 Gene

Domains & Families for LOC100419574 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100419574 Gene

Function for LOC100419574 Gene

Phenotypes From GWAS Catalog for LOC100419574 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100419574 Gene

Localization for LOC100419574 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100419574 Gene

Pathways & Interactions for LOC100419574 Gene

SuperPathways for LOC100419574 Gene

No Data Available

Interacting Proteins for LOC100419574 Gene

Gene Ontology (GO) - Biological Process for LOC100419574 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100419574 Gene

Drugs & Compounds for LOC100419574 Gene

No Compound Related Data Available

Transcripts for LOC100419574 Gene

mRNA/cDNA for LOC100419574 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100419574 Gene

No ASD Table

Relevant External Links for LOC100419574 Gene

GeneLoc Exon Structure for
LOC100419574

Expression for LOC100419574 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100419574 Gene

genes like me logo Genes that share expression patterns with LOC100419574: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100419574 Gene

Orthologs for LOC100419574 Gene

Evolution for LOC100419574 Gene

ENSEMBL:
Gene Tree for LOC100419574 (if available)
TreeFam:
Gene Tree for LOC100419574 (if available)

No data available for Orthologs for LOC100419574 Gene

Paralogs for LOC100419574 Gene

No data available for Paralogs for LOC100419574 Gene

Variants for LOC100419574 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100419574 Gene

Disorders for LOC100419574 Gene

No disorders were found for LOC100419574 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100419574 Gene

Publications for LOC100419574 Gene

No publications were found for LOC100419574 Gene.

Products for LOC100419574 Gene

Sources for LOC100419574 Gene

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