Aliases for LOC100419572 Gene

Aliases for LOC100419572 Gene

  • Uracil DNA Glycosylase Pseudogene 3

External Ids for LOC100419572 Gene

Previous GeneCards Identifiers for LOC100419572 Gene

  • GC04U901350
  • GC04P088088

Summaries for LOC100419572 Gene

GeneCards Summary for LOC100419572 Gene

LOC100419572 (Uracil DNA Glycosylase Pseudogene) is a Pseudogene.

Additional gene information for LOC100419572 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100419572 Gene

Genomics for LOC100419572 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC100419572 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J087165 Enhancer 0.6 ENCODE 250.7 -0.5 -542 1.4 CEBPA RXRA TEAD3 JUND HNF4A REST SP1 ARID3A NFIL3 HLF ENSG00000248196 LOC100419572 lnc-AFF1-2 HSD17B13 KLHL8 lnc-KLHL8-2 ENSG00000285458
GH04J087187 Enhancer 0.7 Ensembl 0.3 +22.1 22128 0.7 GABPA FOXA2 RXRA SP2 PRDM6 ZBTB40 SPI1 FOXA1 ZNF24 JUND HSD17B13 GAPDHP60 LOC100419572 KLHL8 ENSG00000285458
GH04J087192 Enhancer 0.4 Ensembl 0.3 +25.8 25754 0.4 JUND ZNF133 PRDM10 HSD17B13 GAPDHP60 LOC100419572 KLHL8 ENSG00000285458
GH04J087195 Enhancer 0.2 Ensembl 0.3 +28.6 28555 0.4 KLHL8 GAPDHP60 LOC100419572 ENSG00000285458
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100419572 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC100419572 Gene

Latest Assembly
chr4:87,166,846-87,167,931
(GRCh38/hg38)
Size:
1,086 bases
Orientation:
Plus strand

Previous Assembly
chr4:88,087,998-88,089,083
(GRCh37/hg19 by Entrez Gene)
Size:
1,086 bases
Orientation:
Plus strand

Genomic View for LOC100419572 Gene

Genes around LOC100419572 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100419572 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100419572 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100419572 Gene

Proteins for LOC100419572 Gene

Post-translational modifications for LOC100419572 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100419572 Gene

Domains & Families for LOC100419572 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100419572 Gene

Function for LOC100419572 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100419572 Gene

Localization for LOC100419572 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100419572 Gene

Pathways & Interactions for LOC100419572 Gene

PathCards logo

SuperPathways for LOC100419572 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100419572 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100419572 Gene

Drugs & Compounds for LOC100419572 Gene

No Compound Related Data Available

Transcripts for LOC100419572 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100419572 Gene

No ASD Table

Relevant External Links for LOC100419572 Gene

GeneLoc Exon Structure for
LOC100419572

No data available for mRNA/cDNA for LOC100419572 Gene

Expression for LOC100419572 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC100419572 Gene

genes like me logo Genes that share expression patterns with LOC100419572: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100419572 Gene

Orthologs for LOC100419572 Gene

No data available for Orthologs and Evolution for LOC100419572 Gene

Paralogs for LOC100419572 Gene

No data available for Paralogs for LOC100419572 Gene

Variants for LOC100419572 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100419572 Gene

Disorders for LOC100419572 Gene

No disorders were found for LOC100419572 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100419572 Gene

Publications for LOC100419572 Gene

No publications were found for LOC100419572 Gene.

No data available for Mastermind for LOC100419572 Gene

Products for LOC100419572 Gene

Sources for LOC100419572 Gene