Aliases for LOC100419525 Gene

Aliases for LOC100419525 Gene

  • Ribosomal Protein S3A Pseudogene 3

External Ids for LOC100419525 Gene

Previous GeneCards Identifiers for LOC100419525 Gene

  • GC12U901396
  • GC12P031417

Summaries for LOC100419525 Gene

GeneCards Summary for LOC100419525 Gene

LOC100419525 (Ribosomal Protein S3A Pseudogene) is a Pseudogene.

Additional gene information for LOC100419525 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100419525 Gene

Genomics for LOC100419525 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC100419525 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J031271 Enhancer 0.7 ENCODE 0.4 +7.9 7858 0.2 CREB1 CTCF ZNF629 JUND FOXA1 REST RAD21 POLR2A TRIM22 FOXK2 SINHCAF RNU6-618P DENND5B DENND5B-AS1 RNU5F-4P ENSG00000275097 LOC100419525 DDX11
GH12J031269 Enhancer 0.6 Ensembl ENCODE 0.4 +5.5 5545 0.3 CTCF IKZF1 PKNOX1 GATA3 RAD21 ELF1 SINHCAF RNU6-618P DENND5B DENND5B-AS1 RNU5F-4P LOC100419525 ENSG00000275097 DDX11
GH12J031274 Enhancer 0.3 Ensembl 0.4 +11.0 10987 0.8 POLR2A ZNF121 SINHCAF ETFBKMT ENSG00000275097 LOC100419525 DDX11
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100419525 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC100419525 Gene

Genomic Locations for LOC100419525 Gene
chr12:31,264,214-31,264,785
(GRCh38/hg38)
Size:
572 bases
Orientation:
Plus strand
chr12:31,417,148-31,417,719
(GRCh37/hg19)
Size:
572 bases
Orientation:
Plus strand

Genomic View for LOC100419525 Gene

Genes around LOC100419525 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100419525 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100419525 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100419525 Gene

Proteins for LOC100419525 Gene

Post-translational modifications for LOC100419525 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100419525 Gene

Domains & Families for LOC100419525 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100419525 Gene

Function for LOC100419525 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100419525 Gene

Localization for LOC100419525 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100419525 Gene

Pathways & Interactions for LOC100419525 Gene

PathCards logo

SuperPathways for LOC100419525 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100419525 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100419525 Gene

Drugs & Compounds for LOC100419525 Gene

No Compound Related Data Available

Transcripts for LOC100419525 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100419525 Gene

No ASD Table

Relevant External Links for LOC100419525 Gene

GeneLoc Exon Structure for
LOC100419525

No data available for mRNA/cDNA for LOC100419525 Gene

Expression for LOC100419525 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100419525 Gene

Orthologs for LOC100419525 Gene

No data available for Orthologs and Evolution for LOC100419525 Gene

Paralogs for LOC100419525 Gene

No data available for Paralogs for LOC100419525 Gene

Variants for LOC100419525 Gene

Additional Variant Information for LOC100419525 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LOC100419525

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LOC100419525 Gene

Disorders for LOC100419525 Gene

No disorders were found for LOC100419525 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100419525 Gene

Publications for LOC100419525 Gene

No publications were found for LOC100419525 Gene.

No data available for Mastermind for LOC100419525 Gene

Products for LOC100419525 Gene

Sources for LOC100419525 Gene