Aliases for LOC100419516 Gene

Aliases for LOC100419516 Gene

  • MIA SH3 Domain ER Export Factor 2 Pseudogene 3
  • CTAGE Family Member 5, ER Export Factor Pseudogene 3
  • Melanoma Inhibitory Activity 2 Pseudogene 3
  • CTAGE Family Member 5 Pseudogene 3

External Ids for LOC100419516 Gene

Previous GeneCards Identifiers for LOC100419516 Gene

  • GC09U901608
  • GC09M096256

Summaries for LOC100419516 Gene

GeneCards Summary for LOC100419516 Gene

LOC100419516 (MIA SH3 Domain ER Export Factor 2 Pseudogene) is a Pseudogene.

Additional gene information for LOC100419516 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100419516 Gene

Genomics for LOC100419516 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC100419516 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J093493 Enhancer 0.7 Ensembl ENCODE dbSUPER 600.7 +1.6 1608 2.8 CEBPG ZIC2 HNF4A LOC100419516 FAM120AOS FAM120A PHF2
GH09J093496 Enhancer 0.4 Ensembl dbSUPER 600.7 -1.0 -1009 1.2 POLR2A LOC100419516 FAM120A FAM120AOS RNU6-829P RF00017-7721 PHF2
GH09J093502 Enhancer 0.9 ENCODE dbSUPER 0.4 -9.6 -9586 3.2 IKZF2 ATF7 SCRT2 CEBPB RUNX3 NFE2 ZNF316 BCLAF1 ATF2 MAFG LOC100419516 RF00017-7721 FAM120A FAM120AOS PHF2
GH09J093487 Enhancer 0.5 Ensembl dbSUPER 0.7 +4.6 4591 1.6 ZNF585B RBM22 ZNF484 PHF2 ZNF169 ENSG00000232063 LOC100419516 FAM120A FAM120AOS
GH09J093484 Enhancer 0.7 Ensembl dbSUPER 0.4 +8.5 8491 1 NFE2 FOXK2 ZNF316 MAFF MAFK MAFG NCOR1 NFE2L2 ARNT BACH1 LOC100419516 FAM120A FAM120AOS PHF2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100419516 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC100419516 Gene

Genomic Locations for LOC100419516 Gene
chr9:93,493,722-93,494,992
(GRCh38/hg38)
Size:
1,271 bases
Orientation:
Minus strand
chr9:96,256,004-96,257,274
(GRCh37/hg19)
Size:
1,271 bases
Orientation:
Minus strand

Genomic View for LOC100419516 Gene

Genes around LOC100419516 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100419516 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100419516 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100419516 Gene

Proteins for LOC100419516 Gene

Post-translational modifications for LOC100419516 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100419516 Gene

Domains & Families for LOC100419516 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100419516 Gene

Function for LOC100419516 Gene

Phenotypes From GWAS Catalog for LOC100419516 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100419516 Gene

Localization for LOC100419516 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100419516 Gene

Pathways & Interactions for LOC100419516 Gene

PathCards logo

SuperPathways for LOC100419516 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100419516 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100419516 Gene

Drugs & Compounds for LOC100419516 Gene

No Compound Related Data Available

Transcripts for LOC100419516 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100419516 Gene

No ASD Table

Relevant External Links for LOC100419516 Gene

GeneLoc Exon Structure for
LOC100419516

No data available for mRNA/cDNA for LOC100419516 Gene

Expression for LOC100419516 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100419516 Gene

Orthologs for LOC100419516 Gene

No data available for Orthologs and Evolution for LOC100419516 Gene

Paralogs for LOC100419516 Gene

No data available for Paralogs for LOC100419516 Gene

Variants for LOC100419516 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100419516 Gene

Disorders for LOC100419516 Gene

No disorders were found for LOC100419516 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100419516 Gene

Publications for LOC100419516 Gene

No publications were found for LOC100419516 Gene.

No data available for Mastermind for LOC100419516 Gene

Products for LOC100419516 Gene

Sources for LOC100419516 Gene